Difference between revisions of "PWY-2301"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2301 PWY-2301] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2301 PWY-2301] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** myo-inositol biosynthesis
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** Anticodon-binding
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** Proline--tRNA ligase, central part
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
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** 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-PRO-tRNAs]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-06_001090]]
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** 1 a tRNApro[c] '''+''' 1 L-proline[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-prolyl-[tRNApro][c]
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*** [[Ec-26_005440]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
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* Gene: [[Ec-26_002190]]
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** 9 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-10_005870]]
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*** Assignment: EC-NUMBER
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*** [[Ec-21_004120]]
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* Gene: [[Ec-08_005570]]
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*** [[Ec-02_005670]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-12_001850]]
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*** Assignment: EC-NUMBER
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*** [[Ec-26_000990]]
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== Pathways  ==
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*** [[Ec-21_001090]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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*** [[Ec-15_001780]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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*** [[Ec-04_000760]]
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== Reconstruction information  ==
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*** [[Ec-14_006130]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: common name=myo-inositol biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/O51363 O51363]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/O58734 O58734]
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** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
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** [http://www.uniprot.org/uniprot/P43830 P43830]
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** [http://www.uniprot.org/uniprot/P47525 P47525]
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** [http://www.uniprot.org/uniprot/O26708 O26708]
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** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
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** [http://www.uniprot.org/uniprot/Q58635 Q58635]
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** [http://www.uniprot.org/uniprot/P56124 P56124]
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** [http://www.uniprot.org/uniprot/O83195 O83195]
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** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
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** [http://www.uniprot.org/uniprot/O31755 O31755]
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** [http://www.uniprot.org/uniprot/P36431 P36431]
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** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
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** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
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** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
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** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
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** [http://www.uniprot.org/uniprot/P75382 P75382]
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** [http://www.uniprot.org/uniprot/Q49090 Q49090]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P16659 P16659]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Anticodon-binding}}
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{{#set: common name=Proline--tRNA ligase, central part}}
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{{#set: ec number=EC-6.1.1.15}}
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{{#set: gene associated=Ec-26_002190|Ec-08_005570}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:37, 21 March 2018

Reaction PROLINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Anticodon-binding
    • Proline--tRNA ligase, central part
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNApro[c] + 1 L-proline[c] + 1 ATP[c] + 1 H+[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-prolyl-[tRNApro][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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