Difference between revisions of "PWY-3841"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] ** [http://m...")
Line 1: Line 1:
 
[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** purine nucleobases degradation II (anaerobic)
+
** TCA cycle I (prokaryotic)
 
* Synonym(s):
 
* Synonym(s):
−
** purine fermentation
+
** tricarboxylic acid cycle
 +
** citric acid cycle
 +
** Krebs cycle
 +
** Szent-Gyorgyi-Krebs cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''8''' reactions found over '''24''' reactions in the full pathway
+
  '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[FORMYLTHFDEFORMYL-RXN]]
+
* [[2OXOGLUTARATEDEH-RXN]]
−
** 0 associated gene:
+
** 3 associated gene(s):
 +
*** [[Ec-21_002300]]
 +
*** [[Ec-25_000020]]
 +
*** [[Ec-27_004160]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[GLYOHMETRANS-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-14_004260]]
+
*** [[Ec-16_001000]]
−
*** [[Ec-24_002640]]
+
*** [[Ec-12_000170]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
+
* [[ACONITATEHYDR-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-15_001370]]
+
*** [[Ec-16_001000]]
−
*** [[Ec-14_004070]]
+
*** [[Ec-12_000170]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
* [[CITSYN-RXN]]
−
** 3 associated gene(s):
+
** 0 associated gene:
−
*** [[Ec-14_004070]]
+
−
*** [[Ec-07_007470]]
+
−
*** [[Ec-15_001370]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[PYRUFLAVREDUCT-RXN]]
+
* [[FUMHYDR-RXN]]
−
** 3 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-23_002710]]
+
*** [[Ec-25_001360]]
−
*** [[Ec-15_004230]]
+
*** [[Ec-23_003460]]
−
*** [[Ec-18_003420]]
+
** 2 reconstruction source(s) associated:
−
** 1 reconstruction source(s) associated:
+
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-15124]]
+
*** [[orthology-aragem]]
−
** 0 associated gene:
+
* [[ISOCITDEH-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-11_003080]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-15127]]
+
* [[MALATE-DEH-RXN]]
−
** 0 associated gene:
+
** 2 associated gene(s):
−
** 1 reconstruction source(s) associated:
+
*** [[Ec-10_006200]]
 +
*** [[Ec-02_003100]]
 +
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN0-901]]
+
*** [[orthology-aragem]]
 +
* [[SUCCCOASYN-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-20_000230]]
+
*** [[Ec-10_000030]]
−
*** [[Ec-20_000210]]
+
*** [[Ec-02_001020]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Ec-07_007310]]
 +
*** [[Ec-27_006560]]
 +
*** [[Ec-07_002870]]
 +
*** [[Ec-11_000360]]
 +
*** [[Ec-05_003640]]
 +
*** [[Ec-21_003470]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15125 RXN-15125]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8751 RXN-8751]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8753 RXN-8753]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8754 RXN-8754]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1239}}
+
* ECOCYC:
−
{{#set: common name=purine nucleobases degradation II (anaerobic)}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TCA TCA]
−
{{#set: common name=purine fermentation}}
+
* ARACYC:
−
{{#set: reaction found=8}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=TCA TCA]
−
{{#set: total reaction=24}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: completion rate=33.0}}
+
{{#set: taxonomic range=TAX-2157}}
 +
{{#set: common name=TCA cycle I (prokaryotic)}}
 +
{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=10}}
 +
{{#set: completion rate=90.0}}

Revision as of 14:14, 21 March 2018

Pathway TCA

  • taxonomic range:
  • common name:
    • TCA cycle I (prokaryotic)
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Krebs cycle
    • Szent-Gyorgyi-Krebs cycle

Reaction(s) found

9 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-3841&oldid=16926"