Difference between revisions of "PWY-4984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide a oxygenase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
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** chlorophyllide a oxygenase [overall]
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** colanic acid building blocks biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''11''' reactions in the full pathway
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** 2 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 3 [[WATER]][c] '''+''' 2 [[NADP]][c] '''+''' 1 [[CPD-7014]][c]
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* [[PWY-5659]]
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* With common name(s):
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** 0 associated gene:
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** 2 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 2 NADPH[c] '''+''' 2 oxygen[c] '''=>''' 3 H2O[c] '''+''' 2 NADP+[c] '''+''' 1 chlorophyllide b[c]
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* [[PWY-66]]
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** 0 associated gene:
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== Genes associated with this reaction  ==
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* [[PWY-7343]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[Ec-06_002880]]
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* [[PWY-7344]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***GO-TERM
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* [[PWY-7346]]
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* [[Ec-11_003750]]
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** 0 associated gene:
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** ESILICULOSUS_GENOME
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* [[UDPGLUCEPIM-RXN]]
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***GO-TERM
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** 3 associated gene(s):
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* [[Ec-03_003240]]
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*** [[Ec-04_000280]]
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** ESILICULOSUS_GENOME
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*** [[Ec-04_004180]]
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***GO-TERM
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*** [[Ec-05_006710]]
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* [[Ec-28_000110]]
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** 2 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** [[orthology-aragem]]
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* [[Ec-06_002860]]
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== Reaction(s) not found ==
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_002840]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_003590]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
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{{#set: common name=colanic acid building blocks biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: common name=chlorophyllide a oxygenase [overall]}}
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{{#set: total reaction=11}}
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{{#set: ec number=EC-1.14.13.122}}
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{{#set: completion rate=55.0}}
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{{#set: gene associated=Ec-06_002880|Ec-11_003750|Ec-03_003240|Ec-28_000110|Ec-06_002860|Ec-06_002840|Ec-14_003590}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:11, 21 March 2018

Pathway COLANSYN-PWY

  • taxonomic range:
  • common name:
    • colanic acid building blocks biosynthesis
  • Synonym(s):

Reaction(s) found

6 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-4984&oldid=16426"