Difference between revisions of "PWY-5"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CHOCOLA_A CHOCOLA_A] == * smiles: ** CCCCCCCCCCCCCCCC(OCC=C(C=CC=C(C=CC1(C(CCCC=1C)(C)C))C)C)=O...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CHOCOLA_A CHOCOLA_A] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CCCCCCCCCCCCCCCC(OCC=C(C=CC=C(C=CC1(C(CCCC=1C)(C)C))C)C)=O
 +
* inchi key:
 +
** InChIKey=VYGQUTWHTHXGQB-FFHKNEKCSA-N
 
* common name:
 
* common name:
−
** nucleoside diphosphate kinase
+
** all-trans-retinyl palmitate
−
** Nucleoside diphosphate kinase
+
* molecular weight:
−
* ec number:
+
** 524.869   
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** chocola A
 +
** aquasol A
 +
** vitamin A palmitate
 +
** retinol-palmitate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[3.1.1.64-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[DADP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DATP]][c]
+
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 ATP[c] '''+''' 1 dADP[c] '''=>''' 1 ADP[c] '''+''' 1 dATP[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-07_000140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-04_001140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-03_001380]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_004330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-26_003930]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-22_003280]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_005170]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 79-81-2
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
+
* LIPID_MAPS : LMPR01090013
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280531 5280531]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* HMDB : HMDB03648
−
{{#set: common name=nucleoside diphosphate kinase}}
+
* LIGAND-CPD:
−
{{#set: common name=Nucleoside diphosphate kinase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C02588 C02588]
−
{{#set: ec number=EC-2.7.4.6}}
+
* CHEMSPIDER:
−
{{#set: gene associated=Ec-07_000140|Ec-04_001140|Ec-03_001380|Ec-11_004330|Ec-26_003930|Ec-22_003280|Ec-11_005170}}
+
** [http://www.chemspider.com/Chemical-Structure.4444162.html 4444162]
−
{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
+
* CHEBI:
−
{{#set: reconstruction category=orthology|annotation}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17616 17616]
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: smiles=CCCCCCCCCCCCCCCC(OCC=C(C=CC=C(C=CC1(C(CCCC=1C)(C)C))C)C)=O}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: inchi key=InChIKey=VYGQUTWHTHXGQB-FFHKNEKCSA-N}}
 +
{{#set: common name=all-trans-retinyl palmitate}}
 +
{{#set: molecular weight=524.869    }}
 +
{{#set: common name=chocola A|aquasol A|vitamin A palmitate|retinol-palmitate}}
 +
{{#set: consumed by=3.1.1.64-RXN|RETINYL-PALMITATE-ESTERASE-RXN}}

Revision as of 14:36, 21 March 2018

Metabolite CHOCOLA_A

  • smiles:
    • CCCCCCCCCCCCCCCC(OCC=C(C=CC=C(C=CC1(C(CCCC=1C)(C)C))C)C)=O
  • inchi key:
    • InChIKey=VYGQUTWHTHXGQB-FFHKNEKCSA-N
  • common name:
    • all-trans-retinyl palmitate
  • molecular weight:
    • 524.869
  • Synonym(s):
    • chocola A
    • aquasol A
    • vitamin A palmitate
    • retinol-palmitate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 79-81-2
  • LIPID_MAPS : LMPR01090013
  • PUBCHEM:
  • HMDB : HMDB03648
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5&oldid=20086"