Difference between revisions of "PWY-5"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3803 TAX-3803] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3803 TAX-3803]
 
* common name:
 
* common name:
** nucleoside diphosphate kinase
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** canavanine biosynthesis
** Nucleoside diphosphate kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[ATP]][c] '''+''' 1 [[DADP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DATP]][c]
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* [[RXN-10]]
* With common name(s):
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** 1 associated gene(s):
** 1 ATP[c] '''+''' 1 dADP[c] '''=>''' 1 ADP[c] '''+''' 1 dATP[c]
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*** [[Ec-01_001870]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-22]]
* [[Ec-07_000140]]
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** 1 associated gene(s):
** ESILICULOSUS_GENOME
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*** [[Ec-12_005890]]
***GO-TERM
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** 1 reconstruction source(s) associated:
* [[Ec-04_001140]]
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*** [[annotation-esiliculosus_genome]]
** ESILICULOSUS_GENOME
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* [[RXN-9]]
***GO-TERM
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** 1 associated gene(s):
** [[pantograph]]-[[aragem]]
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*** [[Ec-00_004630]]
* [[Ec-03_001380]]
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** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
***GO-TERM
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== Reaction(s) not found ==
* [[Ec-11_004330]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-25 RXN-25]
** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-26_003930]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-22_003280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-11_005170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-3803}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
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{{#set: common name=canavanine biosynthesis}}
* LIGAND-RXN:
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{{#set: reaction found=3}}
** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
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{{#set: total reaction=4}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=75.0}}
{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-07_000140|Ec-04_001140|Ec-03_001380|Ec-11_004330|Ec-26_003930|Ec-22_003280|Ec-11_005170}}
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{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:32, 21 March 2018

Pathway PWY-5

  • taxonomic range:
  • common name:
    • canavanine biosynthesis
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links