Difference between revisions of "PWY-5188"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
 
* common name:
 
* common name:
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** 2,3-Dihydroxy-3-methylvalerate dehydratase
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** tetrapyrrole biosynthesis I (from glutamate)
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** Dihydroxy-acid/6-phosphogluconate dehydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c]
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* [[GLURS-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 H2O[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c]
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*** [[Ec-06_008480]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUTRNAREDUCT-RXN]]
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* Gene: [[Ec-03_000220]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-01_000430]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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* [[GSAAMINOTRANS-RXN]]
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* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
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** 1 associated gene(s):
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[Ec-12_008690]]
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** 2 reconstruction source(s) associated:
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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*** [[orthology-aragem]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[OHMETHYLBILANESYN-RXN]]
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* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
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** 1 associated gene(s):
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** [[Ec-25_002760]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* [[PORPHOBILSYNTH-RXN]]
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* Category: [[annotation]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-00_001750]]
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*** Tool: [[pathwaytools]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[UROGENIIISYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_004890]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5188 PWY-5188]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
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{{#set: taxonomic range=TAX-1117}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.uniprot.org/uniprot/P55186 P55186]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
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{{#set: taxonomic range=TAX-3398}}
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** [http://www.uniprot.org/uniprot/P05791 P05791]
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{{#set: common name=tetrapyrrole biosynthesis I (from glutamate)}}
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** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/P44851 P44851]
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/Q02139 Q02139]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
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** [http://www.uniprot.org/uniprot/P39522 P39522]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
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{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
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{{#set: ec number=EC-4.2.1.9}}
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{{#set: gene associated=Ec-03_000220}}
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{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:27, 21 March 2018

Pathway PWY-5188

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5188&oldid=27031"