Difference between revisions of "PWY-5466"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Gene == Gene Ec-08_003150 == * left end position: ** 2967901 * transcription direction: ** NEGATIVE * right end position: ** 2974935 * centisome position: ** 44.3...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-08_003150 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2967901
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* common name:
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* transcription direction:
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** Anticodon-binding
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** NEGATIVE
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** Proline--tRNA ligase, central part
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* right end position:
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* ec number:
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** 2974935
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** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
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* centisome position:
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** 44.316437   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0126_0007
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** Esi0126_0007
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-PRO-tRNAs]][c] '''+''' 1 [[AMP]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 a tRNApro[c] '''+''' 1 L-proline[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-prolyl-[tRNApro][c] '''+''' 1 AMP[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_002190]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-08_005570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2967901}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2974935}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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{{#set: centisome position=44.316437    }}
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* UNIPROT:
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{{#set: common name=Esi_0126_0007|Esi0126_0007}}
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** [http://www.uniprot.org/uniprot/O51363 O51363]
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/O58734 O58734]
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** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
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** [http://www.uniprot.org/uniprot/P43830 P43830]
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** [http://www.uniprot.org/uniprot/P47525 P47525]
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** [http://www.uniprot.org/uniprot/O26708 O26708]
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** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
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** [http://www.uniprot.org/uniprot/Q58635 Q58635]
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** [http://www.uniprot.org/uniprot/P56124 P56124]
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** [http://www.uniprot.org/uniprot/O83195 O83195]
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** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
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** [http://www.uniprot.org/uniprot/O31755 O31755]
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** [http://www.uniprot.org/uniprot/P36431 P36431]
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** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
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** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
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** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
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** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
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** [http://www.uniprot.org/uniprot/P75382 P75382]
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** [http://www.uniprot.org/uniprot/Q49090 Q49090]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P16659 P16659]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Anticodon-binding}}
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{{#set: common name=Proline--tRNA ligase, central part}}
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{{#set: ec number=EC-6.1.1.15}}
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{{#set: gene associated=Ec-26_002190|Ec-08_005570}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:19, 17 March 2018

Gene Ec-08_003150

  • left end position:
    • 2967901
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2974935
  • centisome position:
    • 44.316437
  • Synonym(s):
    • Esi_0126_0007
    • Esi0126_0007

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5466&oldid=12529"