Difference between revisions of "PWY-5629"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Gene == Gene Ec-12_006200 == * left end position: ** 5586987 * transcription direction: ** POSITIVE * right end position: ** 5590541 * centisome position: ** 67.0...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
+
== Gene Ec-12_006200 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5586987
−
* common name:
+
* transcription direction:
−
** pyrroline-5-carboxylate reductase
+
** POSITIVE
−
** Pyrroline-5-carboxylate reductase
+
* right end position:
−
** NAD(P)-binding domain
+
** 5590541
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
+
** 67.02198   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0115_0018
 +
** Esi0115_0018
 +
** MHflX
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN0-5462]]
−
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***automated-name-match
−
** 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-07_007340]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-05_006410]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-07_007350]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-07_007360]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-03_004680]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
+
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=5586987}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
+
{{#set: transcription direction=POSITIVE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
+
{{#set: right end position=5590541}}
−
* UNIPROT:
+
{{#set: centisome position=67.02198    }}
−
** [http://www.uniprot.org/uniprot/P32322 P32322]
+
{{#set: common name=Esi_0115_0018|Esi0115_0018|MHflX}}
−
** [http://www.uniprot.org/uniprot/P27771 P27771]
+
{{#set: reaction associated=RXN0-5462}}
−
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
+
−
** [http://www.uniprot.org/uniprot/P14383 P14383]
+
−
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
+
−
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
+
−
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
+
−
** [http://www.uniprot.org/uniprot/P22008 P22008]
+
−
** [http://www.uniprot.org/uniprot/P54904 P54904]
+
−
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
+
−
** [http://www.uniprot.org/uniprot/P17817 P17817]
+
−
** [http://www.uniprot.org/uniprot/P32263 P32263]
+
−
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
+
−
** [http://www.uniprot.org/uniprot/P46725 P46725]
+
−
** [http://www.uniprot.org/uniprot/P74572 P74572]
+
−
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=pyrroline-5-carboxylate reductase}}
+
−
{{#set: common name=Pyrroline-5-carboxylate reductase}}
+
−
{{#set: common name=NAD(P)-binding domain}}
+
−
{{#set: ec number=EC-1.5.1.2}}
+
−
{{#set: gene associated=Ec-07_007340|Ec-05_006410|Ec-07_007350|Ec-07_007360|Ec-03_004680}}
+
−
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:24, 17 March 2018

Gene Ec-12_006200

  • left end position:
    • 5586987
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5590541
  • centisome position:
    • 67.02198
  • Synonym(s):
    • Esi_0115_0018
    • Esi0115_0018
    • MHflX

Reactions associated

  • RXN0-5462
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5629&oldid=8813"