Difference between revisions of "PWY-5744"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal-dependent decarbo...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
 
* common name:
 
* common name:
** Pyridoxal-dependent decarboxylase
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** glyoxylate assimilation
* ec number:
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** [http://enzyme.expasy.org/EC/4.1.2.27 EC-4.1.2.27]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''11''' reactions in the full pathway
** 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=>''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c] '''+''' 1 [[CPD-14766]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
* With common name(s):
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** 7 associated gene(s):
** 1 phytosphingosine 1-phosphate[c] '''=>''' 1 O-phosphoethanolamine[c] '''+''' 1 2-hydroxyhexadecanal[c]
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*** [[Ec-19_003040]]
 
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*** [[Ec-03_001890]]
== Genes associated with this reaction  ==
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*** [[Ec-14_002460]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-01_009720]]
* Gene: [[Ec-03_002920]]
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*** [[Ec-01_010970]]
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-19_003230]]
*** Assignment: EC-NUMBER
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*** [[Ec-20_002520]]
== Pathways  ==
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** 2 reconstruction source(s) associated:
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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*** [[annotation-esiliculosus_genome]]
** '''4''' reactions found over '''11''' reactions in the full pathway
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*** [[orthology-aragem]]
== Reconstruction information  ==
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* [[RXN-6383]]
* Category: [[annotation]]
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** 2 associated gene(s):
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-14_006530]]
*** Tool: [[pathwaytools]]
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*** [[Ec-17_000320]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRAMALYL-COA-LYASE-RXN CITRAMALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13230 RXN-13230]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8965 RXN-8965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-200795}}
{{#set: common name=Pyridoxal-dependent decarboxylase}}
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{{#set: taxonomic range=TAX-183924}}
{{#set: ec number=EC-4.1.2.27}}
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{{#set: common name=glyoxylate assimilation}}
{{#set: gene associated=Ec-03_002920}}
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{{#set: reaction found=2}}
{{#set: in pathway=PWY-7119}}
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{{#set: total reaction=11}}
{{#set: reconstruction category=annotation}}
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{{#set: completion rate=18.0}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Pathway PWY-5744

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links