Difference between revisions of "PWY-5970"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-330...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** bisabolene biosynthesis (engineered)
+
** flavin biosynthesis I (bacteria and plants)
 
* Synonym(s):
 
* Synonym(s):
 +
** riboflavin, FMN and FAD biosynthesis
 +
** vitamin B2 biosynthesis
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''3''' reactions found over '''6''' reactions in the full pathway
+
  '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[FPPSYN-RXN]]
+
* [[DIOHBUTANONEPSYN-RXN]]
−
** 3 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Ec-07_006170]]
+
*** [[Ec-27_004040]]
−
*** [[Ec-10_003020]]
+
** 1 reconstruction source(s) associated:
−
*** [[Ec-16_004330]]
+
*** [[annotation-esiliculosus_genome]]
 +
* [[FADSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-01_006670]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[GTP-CYCLOHYDRO-II-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-27_004040]]
 +
*** [[Ec-02_005710]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[GPPSYN-RXN]]
+
* [[LUMAZINESYN-RXN]]
−
** 12 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Ec-07_006170]]
+
*** [[Ec-27_002140]]
−
*** [[Ec-16_004330]]
+
** 1 reconstruction source(s) associated:
−
*** [[Ec-08_002270]]
+
*** [[annotation-esiliculosus_genome]]
−
*** [[Ec-10_003020]]
+
* [[RIBOFLAVIN-SYN-RXN]]
−
*** [[Ec-00_007350]]
+
** 1 associated gene(s):
−
*** [[Ec-14_006550]]
+
*** [[Ec-00_004570]]
−
*** [[Ec-24_003910]]
+
−
*** [[Ec-26_003280]]
+
−
*** [[Ec-21_000990]]
+
−
*** [[Ec-25_002110]]
+
−
*** [[Ec-17_001240]]
+
−
*** [[Ec-18_000990]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[IPPISOM-RXN]]
+
* [[RIBOFLAVINKIN-RXN]]
−
** 2 associated gene(s):
+
** 4 associated gene(s):
−
*** [[Ec-11_001030]]
+
*** [[Ec-04_001490]]
−
*** [[Ec-18_002690]]
+
*** [[Ec-04_004280]]
 +
*** [[Ec-10_002950]]
 +
*** [[Ec-14_005260]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIBOFLAVINSYNDEAM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-07_005770]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIBOFLAVINSYNREDUC-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Ec-05_004210]]
 +
*** [[Ec-23_000290]]
 +
*** [[Ec-07_005770]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8429 RXN-8429]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8549 RXN-8549]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8550 RXN-8550]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* ECOCYC:
−
{{#set: taxonomic range=TAX-1224}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
−
{{#set: common name=bisabolene biosynthesis (engineered)}}
+
* ARACYC:
−
{{#set: reaction found=3}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
−
{{#set: total reaction=6}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: completion rate=50.0}}
+
{{#set: taxonomic range=TAX-2}}
 +
{{#set: common name=flavin biosynthesis I (bacteria and plants)}}
 +
{{#set: common name=riboflavin, FMN and FAD biosynthesis|vitamin B2 biosynthesis}}
 +
{{#set: reaction found=8}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=89.0}}

Revision as of 14:13, 21 March 2018

Pathway RIBOSYN2-PWY

  • taxonomic range:
  • common name:
    • flavin biosynthesis I (bacteria and plants)
  • Synonym(s):
    • riboflavin, FMN and FAD biosynthesis
    • vitamin B2 biosynthesis

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5970&oldid=16728"