Difference between revisions of "PWY-5970"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
** [http://enzyme.expasy.org/EC/1.14.12.23 EC-1.14.12.23]
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* common name:
 +
** bisabolene biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[NADH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[BENZENE-NO2]][c] '''=>''' 1 [[CATECHOL]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c]
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* [[FPPSYN-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 NADH[c] '''+''' 1 oxygen[c] '''+''' 1 nitrobenzene[c] '''=>''' 1 catechol[c] '''+''' 1 NAD+[c] '''+''' 1 nitrite[c]
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*** [[Ec-07_006170]]
 
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*** [[Ec-10_003020]]
== Genes associated with this reaction  ==
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*** [[Ec-16_004330]]
Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
* [[Ec-07_007260]]
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*** [[annotation-esiliculosus_genome]]
** [[pantograph]]-[[aragem]]
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*** [[orthology-aragem]]
* [[Ec-24_002140]]
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* [[GPPSYN-RXN]]
** [[pantograph]]-[[aragem]]
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** 12 associated gene(s):
* [[Ec-24_002150]]
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*** [[Ec-07_006170]]
** [[pantograph]]-[[aragem]]
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*** [[Ec-16_004330]]
* [[Ec-00_005820]]
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*** [[Ec-08_002270]]
** [[pantograph]]-[[aragem]]
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*** [[Ec-10_003020]]
* [[Ec-00_005850]]
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*** [[Ec-00_007350]]
** [[pantograph]]-[[aragem]]
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*** [[Ec-14_006550]]
* [[Ec-10_006240]]
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*** [[Ec-24_003910]]
** [[pantograph]]-[[aragem]]
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*** [[Ec-26_003280]]
== Pathways  ==
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*** [[Ec-21_000990]]
* [[PWY-5640]], nitrobenzene degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5640 PWY-5640]
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*** [[Ec-25_002110]]
** '''1''' reactions found over '''1''' reactions in the full pathway
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*** [[Ec-17_001240]]
== Reconstruction information  ==
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*** [[Ec-18_000990]]
* [[orthology]]:
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** 2 reconstruction source(s) associated:
** [[pantograph]]:
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*** [[annotation-esiliculosus_genome]]
*** [[aragem]]
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*** [[orthology-aragem]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
 +
*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8429 RXN-8429]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8549 RXN-8549]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8550 RXN-8550]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
** [http://www.genome.jp/dbget-bin/www_bget?R07706 R07706]
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{{#set: taxonomic range=TAX-1224}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=bisabolene biosynthesis (engineered)}}
{{#set: ec number=EC-1.14.12.23}}
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{{#set: reaction found=3}}
{{#set: gene associated=Ec-07_007260|Ec-24_002140|Ec-24_002150|Ec-00_005820|Ec-00_005850|Ec-10_006240}}
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{{#set: total reaction=6}}
{{#set: in pathway=PWY-5640}}
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{{#set: completion rate=50.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Revision as of 21:31, 17 March 2018

Pathway PWY-7102

  • taxonomic range:
  • common name:
    • bisabolene biosynthesis (engineered)
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links