Difference between revisions of "PWY-5996"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Lactonase domai...")
 
(Created page with "Category:Gene == Gene Ec-02_003930 == * left end position: ** 4248298 * transcription direction: ** POSITIVE * right end position: ** 4261664 * centisome position: ** 65.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] ==
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== Gene Ec-02_003930 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4248298
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* common name:
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* transcription direction:
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** Lactonase domain-containing protein
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.1.17 EC-3.1.1.17]
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** 4261664
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* centisome position:
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** 65.08018   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0041_0131
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** Esi0041_0131
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** CDPK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PROTEIN-KINASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[GLC-D-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUCONATE]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-21_001990]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-10_002500]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7165]], L-ascorbate biosynthesis VI (engineered pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7165 PWY-7165]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5530]], sorbitol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5530 PWY-5530]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[DHGLUCONATE-PYR-CAT-PWY]], glucose degradation (oxidative): [http://metacyc.org/META/NEW-IMAGE?object=DHGLUCONATE-PYR-CAT-PWY DHGLUCONATE-PYR-CAT-PWY]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4248298}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10440 10440]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4261664}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01519 R01519]
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{{#set: centisome position=65.08018    }}
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* UNIPROT:
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{{#set: common name=Esi_0041_0131|Esi0041_0131|CDPK}}
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** [http://www.uniprot.org/uniprot/Q01578 Q01578]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Lactonase domain-containing protein}}
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{{#set: ec number=EC-3.1.1.17}}
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{{#set: gene associated=Ec-21_001990|Ec-10_002500}}
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{{#set: in pathway=PWY-2221|PWY-7165|NPGLUCAT-PWY|GLUCOSE1PMETAB-PWY|PWY-5530|DHGLUCONATE-PYR-CAT-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:33, 17 March 2018

Gene Ec-02_003930

  • left end position:
    • 4248298
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4261664
  • centisome position:
    • 65.08018
  • Synonym(s):
    • Esi_0041_0131
    • Esi0041_0131
    • CDPK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5996&oldid=9373"