Difference between revisions of "PWY-6309"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
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** pyruvate carboxylase
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** L-tryptophan degradation XI (mammalian, via kynurenine)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''17''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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* [[2.6.1.7-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''+''' 1 pyruvate[c] '''=>''' 1 oxaloacetate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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*** [[Ec-00_001230]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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* [[Ec-03_001890]]
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** 3 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-26_002430]]
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***EC-NUMBER
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*** [[Ec-26_001830]]
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== Pathways  ==
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*** [[Ec-28_001680]]
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** 1 reconstruction source(s) associated:
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** '''10''' reactions found over '''14''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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* [[PWY-5651]]
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** '''9''' reactions found over '''16''' reactions in the full pathway
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** 0 associated gene:
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* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
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* [[PWY-5652]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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** 0 associated gene:
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* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
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* [[RXN-10720]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** 0 associated gene:
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** 1 reconstruction source(s) associated:
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** '''10''' reactions found over '''12''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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* [[RXN-10721]]
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* [[annotation]]:
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** 1 associated gene(s):
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** [[pathwaytools]]:
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*** [[Ec-00_001230]]
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*** [[esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10722]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-8665]]
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** 1 associated gene(s):
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*** [[Ec-20_001720]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=KYNURENINASE-RXN KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-40674}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
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{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
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* LIGAND-RXN:
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{{#set: reaction found=8}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
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{{#set: total reaction=17}}
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* UNIPROT:
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{{#set: completion rate=47.0}}
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** [http://www.uniprot.org/uniprot/Q05920 Q05920]
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** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
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** [http://www.uniprot.org/uniprot/P95127 P95127]
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** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
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** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
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** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
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** [http://www.uniprot.org/uniprot/P11498 P11498]
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** [http://www.uniprot.org/uniprot/P52873 P52873]
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** [http://www.uniprot.org/uniprot/P11154 P11154]
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** [http://www.uniprot.org/uniprot/P32327 P32327]
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** [http://www.uniprot.org/uniprot/O17732 O17732]
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** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
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** [http://www.uniprot.org/uniprot/Q16921 Q16921]
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** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate carboxylase}}
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{{#set: ec number=EC-6.4.1.1}}
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{{#set: gene associated=Ec-03_001890}}
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{{#set: in pathway=PWY-6142|PWY-6146|P42-PWY|PWY-5750|PWY66-399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:06, 21 March 2018

Pathway PWY-6309

  • taxonomic range:
  • common name:
    • L-tryptophan degradation XI (mammalian, via kynurenine)
  • Synonym(s):

Reaction(s) found

8 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6309&oldid=24516"