Difference between revisions of "PWY-6883"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9615 RXN-9615] == * direction: ** LEFT-TO-RIGHT * common name: ** Ammonium transporter ** ammon...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9615 RXN-9615] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** Ammonium transporter
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** pyruvate fermentation to butanol II (engineered)
** ammonium transporter
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* Synonym(s):
 
* Synonym(s):
 +
** 1-butanol synthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[AMMONIUM]][e] '''=>''' 1 [[AMMONIUM]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 ammonium[e] '''=>''' 1 ammonium[c]
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*** [[Ec-26_003940]]
 
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*** [[Ec-24_000870]]
== Genes associated with this reaction  ==
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*** [[Ec-22_002850]]
Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
* Gene: [[Ec-06_004420]]
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*** [[annotation-esiliculosus_genome]]
** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-11662]]
* Gene: [[Ec-00_010700]]
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** 2 associated gene(s):
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-19_005290]]
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-14_006530]]
* Gene: [[Ec-23_002920]]
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** 2 reconstruction source(s) associated:
** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-aragem]]
* Gene: [[Ec-06_004450]]
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* [[RXN-11667]]
** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-17_000320]]
* Gene: [[Ec-16_002330]]
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*** [[Ec-14_006530]]
** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-esiliculosus_genome]]
* Gene: [[Ec-21_004790]]
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*** [[orthology-aragem]]
** Source: [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTANAL-DEHYDROGENASE-RXN BUTANAL-DEHYDROGENASE-RXN]
* Gene: [[Ec-04_006550]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12558 RXN-12558]
** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161]
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_003810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-05_006780]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_006960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28747 28747]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate fermentation to butanol II (engineered)}}
{{#set: common name=Ammonium transporter}}
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{{#set: common name=1-butanol synthesis}}
{{#set: common name=ammonium transporter}}
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{{#set: reaction found=3}}
{{#set: gene associated=Ec-06_004420|Ec-00_010700|Ec-23_002920|Ec-06_004450|Ec-16_002330|Ec-21_004790|Ec-04_006550|Ec-09_003810|Ec-05_006780|Ec-00_006960}}
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{{#set: total reaction=6}}
{{#set: in pathway=}}
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{{#set: completion rate=50.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:08, 21 March 2018

Pathway PWY-6883

  • taxonomic range:
  • common name:
    • pyruvate fermentation to butanol II (engineered)
  • Synonym(s):
    • 1-butanol synthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links