Difference between revisions of "PWY-6886"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADCLY-RXN ADCLY-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.1...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADCLY-RXN ADCLY-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://enzyme.expasy.org/EC/4.1.3.38 EC-4.1.3.38]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* common name:
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** 1-butanol autotrophic biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''11''' reactions in the full pathway
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** 1 [[4-AMINO-4-DEOXYCHORISMATE]][c] '''<=>''' 1 [[P-AMINO-BENZOATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 4-amino-4-deoxychorismate[c] '''<=>''' 1 4-aminobenzoate[c] '''+''' 1 H+[c] '''+''' 1 pyruvate[c]
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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== Genes associated with this reaction  ==
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*** [[Ec-26_004120]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-01_007170]]
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*** [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** [[orthology-aragem]]
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== Pathways  ==
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* [[3PGAREARR-RXN]]
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* [[PWY-6543]], 4-aminobenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6543 PWY-6543]
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** 7 associated gene(s):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[Ec-27_000330]]
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== Reconstruction information  ==
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*** [[Ec-24_002670]]
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* Category: [[orthology]]
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*** [[Ec-10_005410]]
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** Source: [[orthology-aragem]]
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*** [[Ec-03_002160]]
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*** Tool: [[pantograph]]
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*** [[Ec-03_002170]]
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*** [[Ec-01_000980]]
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*** [[Ec-06_009930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[CALVIN-PWY]]
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** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-101]]
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** 0 associated gene:
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* [[PWY-6883]]
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** 0 associated gene:
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* [[PYRUVDEH-RXN]]
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** 8 associated gene(s):
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*** [[Ec-27_004160]]
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*** [[Ec-25_000140]]
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*** [[Ec-25_000020]]
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*** [[Ec-01_010530]]
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*** [[Ec-23_002710]]
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*** [[Ec-27_000530]]
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*** [[Ec-18_000080]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-186801}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16201 16201]
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{{#set: taxonomic range=TAX-33682}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05553 R05553]
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{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=8}}
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{{#set: ec number=EC-4.1.3.38}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Ec-01_007170}}
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{{#set: completion rate=73.0}}
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{{#set: in pathway=PWY-6543}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:16, 21 March 2018

Pathway PWY-6886

Reaction(s) found

8 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6886&oldid=25716"