Difference between revisions of "PWY-6901"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** acyl-CoA oxidase, partial
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** superpathway of glucose and xylose degradation
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** acyl-CoA oxidase
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** Acyl-CoA oxidase/dehydrogenase, central domain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''12''' reactions in the full pathway
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15668]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-15654]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 oxygen[c] '''+''' 1 4-cis-undecenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 2-trans, 4-cis-undecadienoyl-CoA[c]
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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== Genes associated with this reaction  ==
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*** [[Ec-26_004120]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-08_006390]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[2TRANSKETO-RXN]]
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* Gene: [[Ec-26_004320]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-20_002600]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-22_002920]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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* [[3PGAREARR-RXN]]
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== Pathways  ==
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** 7 associated gene(s):
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* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7337 PWY-7337]
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*** [[Ec-27_000330]]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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*** [[Ec-24_002670]]
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== Reconstruction information  ==
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*** [[Ec-10_005410]]
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* Category: [[annotation]]
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*** [[Ec-03_002160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-03_002170]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-01_000980]]
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*** [[Ec-06_009930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[L-LACTATE-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_006780]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PENTOSE-P-PWY]]
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** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[XYLCAT-PWY]]
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** 0 associated gene:
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: common name=superpathway of glucose and xylose degradation}}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: reaction found=9}}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: total reaction=12}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: completion rate=75.0}}
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{{#set: gene associated=Ec-08_006390|Ec-26_004320|Ec-22_002920}}
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{{#set: in pathway=PWY-7337}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:18, 21 March 2018

Pathway PWY-6901

  • taxonomic range:
  • common name:
    • superpathway of glucose and xylose degradation
  • Synonym(s):

Reaction(s) found

9 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6901&oldid=25992"