Difference between revisions of "PWY-7398"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec number...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** hydroxylated fatty acid biosynthesis (plants)
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** 5'-nucleotidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''7''' reactions found over '''22''' reactions in the full pathway
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* With identifiers:
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* [[RXN-13322]]
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** 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[URIDINE]][c] '''+''' 1 [[Pi]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-28_003080]]
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** 1 UMP[c] '''+''' 1 H2O[c] '''=>''' 1 uridine[c] '''+''' 1 phosphate[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[RXN-16150]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Ec-12_005060]]
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*** [[Ec-16_002160]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-15_000820]]
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* [[RXN-16151]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Assignment: GO-TERM
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*** [[Ec-16_002160]]
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* Gene: [[Ec-05_000950]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-16152]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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*** [[Ec-16_002160]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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* [[RXN-16157]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Ec-16_002160]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-16158]]
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** 1 associated gene(s):
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*** [[Ec-16_002160]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-9670]]
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−
** 1 associated gene(s):
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*** [[Ec-16_002160]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14484 RXN-14484]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14485 RXN-14485]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14486 RXN-14486]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14488 RXN-14488]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14491 RXN-14491]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14492 RXN-14492]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14493 RXN-14493]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14494 RXN-14494]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14495 RXN-14495]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16148 RXN-16148]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16149 RXN-16149]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16153 RXN-16153]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16154 RXN-16154]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16155 RXN-16155]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16156 RXN-16156]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* RHEA:
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{{#set: common name=hydroxylated fatty acid biosynthesis (plants)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
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{{#set: reaction found=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=22}}
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{{#set: common name=5'-nucleotidase}}
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{{#set: completion rate=32.0}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Ec-12_005060|Ec-15_000820|Ec-05_000950}}
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{{#set: in pathway=PWY-7185}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:14, 21 March 2018

Reaction RXN-14025

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UMP[c] + 1 H2O[c] => 1 uridine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7398&oldid=16865"