Difference between revisions of "PWY-7560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide a oxygenase...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-57...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** chlorophyllide a oxygenase [overall]
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** methylerythritol phosphate pathway II
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122]
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* Synonym(s):
 
* Synonym(s):
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** nonmevalonate isopentenyl diphosphate biosynthesis
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** methylerythritol phosphate degradation
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** MEP degradation
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** deoxyxylulose phosphate pathway
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** DOXP pathway
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** Rohmer pathway
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
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** nonmevalonate isoprenoid pathway
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** MEP pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''9''' reactions in the full pathway
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** 2 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[NADP]][c] '''+''' 3 [[WATER]][c] '''+''' 1 [[CPD-7014]][c]
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* [[2.7.1.148-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 2 NADPH[c] '''+''' 2 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 2 oxygen[c] '''=>''' 2 NADP+[c] '''+''' 3 H2O[c] '''+''' 1 chlorophyllide b[c]
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*** [[Ec-10_001370]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-06_002840]]
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* [[2.7.7.60-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***GO-TERM
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*** [[Ec-12_008050]]
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* [[Ec-28_000110]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***GO-TERM
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* [[DXPREDISOM-RXN]]
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* [[Ec-14_003590]]
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** 1 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-12_007940]]
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***GO-TERM
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** 2 reconstruction source(s) associated:
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* [[Ec-06_002880]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***GO-TERM
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* [[DXS-RXN]]
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* [[Ec-11_003750]]
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** 1 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-15_004230]]
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***GO-TERM
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** 2 reconstruction source(s) associated:
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* [[Ec-06_002860]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***GO-TERM
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* [[IPPISOM-RXN]]
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* [[Ec-03_003240]]
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** 2 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-11_001030]]
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***GO-TERM
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*** [[Ec-18_002690]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* [[annotation]]:
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*** [[orthology-aragem]]
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** [[pathwaytools]]:
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* [[ISPH2-RXN]]
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*** [[esiliculosus_genome]]
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** 1 associated gene(s):
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*** [[Ec-06_002680]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN0-302]]
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** 1 associated gene(s):
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*** [[Ec-25_000990]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-882]]
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** 1 associated gene(s):
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*** [[Ec-03_003610]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-884]]
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** 1 associated gene(s):
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*** [[Ec-06_002680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-5794}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
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{{#set: taxonomic range=TAX-1117}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
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{{#set: common name=methylerythritol phosphate pathway II}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
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{{#set: common name=chlorophyllide a oxygenase [overall]}}
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{{#set: reaction found=9}}
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{{#set: ec number=EC-1.14.13.122}}
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{{#set: total reaction=9}}
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{{#set: gene associated=Ec-06_002840|Ec-28_000110|Ec-14_003590|Ec-06_002880|Ec-11_003750|Ec-06_002860|Ec-03_003240}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:01, 21 March 2018

Pathway PWY-7560

  • taxonomic range:
  • common name:
    • methylerythritol phosphate pathway II
  • Synonym(s):
    • nonmevalonate isopentenyl diphosphate biosynthesis
    • methylerythritol phosphate degradation
    • MEP degradation
    • deoxyxylulose phosphate pathway
    • DOXP pathway
    • Rohmer pathway
    • isopentenyl diphosphate biosynthesis -- mevalonate-independent
    • nonmevalonate isoprenoid pathway
    • MEP pathway

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7560&oldid=23961"