Difference between revisions of "Pi"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * direction: ** REVERSIBLE * common name: ** aminomethyltransferase ** Aminom...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup ** Be...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aminomethyltransferase
+
** Thiolase-like, subgroup
−
** Aminomethyltransferase
+
** Beta-ketoacyl synthase, N-terminal
 +
** beta-ketoacyl synthase, partial
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.2.10 EC-2.1.2.10]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Decanoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-oxo-dodecanoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c] '''<=>''' 1 ammonium[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c]
+
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a decanoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-dodecanoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-20_004610]]
+
* [[Ec-12_000640]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***EC-NUMBER
−
* [[Ec-24_001010]]
+
* [[Ec-27_003480]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***EC-NUMBER
−
* [[Ec-00_002470]]
+
* [[Ec-27_002090]]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-07_004110]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 +
* [[Ec-12_000650]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''20''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
+
{{#set: common name=Thiolase-like, subgroup}}
−
* LIGAND-RXN:
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
* UNIPROT:
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.uniprot.org/uniprot/P25285 P25285]
+
{{#set: ec number=EC-2.3.1.86}}
−
** [http://www.uniprot.org/uniprot/P28337 P28337]
+
{{#set: ec number=EC-2.3.1.85}}
−
** [http://www.uniprot.org/uniprot/P27248 P27248]
+
{{#set: ec number=EC-2.3.1.41}}
−
** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
+
{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-27_002090|Ec-12_000650}}
−
** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
+
{{#set: in pathway=PWY-5994}}
−
** [http://www.uniprot.org/uniprot/P48728 P48728]
+
−
** [http://www.uniprot.org/uniprot/P49364 P49364]
+
−
** [http://www.uniprot.org/uniprot/P49095 P49095]
+
−
** [http://www.uniprot.org/uniprot/P49363 P49363]
+
−
** [http://www.uniprot.org/uniprot/P54260 P54260]
+
−
** [http://www.uniprot.org/uniprot/P49361 P49361]
+
−
** [http://www.uniprot.org/uniprot/P49362 P49362]
+
−
** [http://www.uniprot.org/uniprot/O49954 O49954]
+
−
** [http://www.uniprot.org/uniprot/P93256 P93256]
+
−
** [http://www.uniprot.org/uniprot/O32955 O32955]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=aminomethyltransferase}}
+
−
{{#set: common name=Aminomethyltransferase}}
+
−
{{#set: ec number=EC-2.1.2.10}}
+
−
{{#set: gene associated=Ec-20_004610|Ec-24_001010|Ec-00_002470|Ec-07_004110}}
+
−
{{#set: in pathway=GLYCLEAV-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 22:50, 17 March 2018

Reaction RXN-9652

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiolase-like, subgroup
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.





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