Difference between revisions of "RXN-10656"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTHIOCYS-RXN CYSTHIOCYS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phospha...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10656 RXN-10656] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTHIOCYS-RXN CYSTHIOCYS-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10656 RXN-10656] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CYSTINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[THIOCYSTEINE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
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** 1 [[3-hydroxy-cis-D7-tetraecenoyl-ACPs]][c] '''=>''' 1 [[Trans-D3-cis-D7-tetradecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
** 1 L-cystine[c] '''+''' 1 H2O[c] '''=>''' 1 thiocysteine[c] '''+''' 1 ammonium[c] '''+''' 1 pyruvate[c]
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** 1 a (3R)-3-hydroxy cis Δ7-tetradecenoyl-[acp][c] '''=>''' 1 a trans-Δ3-cis-Δ7-tetradecenoyl-[acp][c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-12_003100]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[gap-filling]]
** [[pathwaytools]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[esiliculosus_genome]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24930 24930]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02408 R02408]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
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{{#set: ec number=EC-4.2.1.59}}
{{#set: ec number=EC-4.4.1.1}}
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{{#set: in pathway=PWY-6282}}
{{#set: gene associated=Ec-12_003100}}
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{{#set: reconstruction category=gap-filling}}
{{#set: in pathway=}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:00, 21 March 2018

Reaction RXN-10656

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links