Difference between revisions of "RXN-11056"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** REVERSIBLE * common name: ** Argininosuccinat...")
(Created page with "Category:Gene == Gene Ec-27_000400 == * left end position: ** 291458 * transcription direction: ** POSITIVE * right end position: ** 296553 * centisome position: ** 4.5187...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
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== Gene Ec-27_000400 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 291458
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* common name:
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* transcription direction:
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** Argininosuccinate lyase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
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** 296553
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* centisome position:
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** 4.518794   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0122_0061
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** Esi0122_0061
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** mGST
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[FUM]][c] '''+''' 1 [[ARG]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-arginino-succinate[c] '''<=>''' 1 fumarate[c] '''+''' 1 L-arginine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_005890]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[GST-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13673]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15680]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7112]]
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* [[PWY-6842]]
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* [[PWY-4061]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=291458}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=296553}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
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{{#set: centisome position=4.518794    }}
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* UNIPROT:
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{{#set: common name=Esi_0122_0061|Esi0122_0061|mGST}}
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** [http://www.uniprot.org/uniprot/P50987 P50987]
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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** [http://www.uniprot.org/uniprot/Q46104 Q46104]
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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** [http://www.uniprot.org/uniprot/P11447 P11447]
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** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
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** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
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** [http://www.uniprot.org/uniprot/P44314 P44314]
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** [http://www.uniprot.org/uniprot/Q58201 Q58201]
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** [http://www.uniprot.org/uniprot/P33110 P33110]
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** [http://www.uniprot.org/uniprot/Q01592 Q01592]
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** [http://www.uniprot.org/uniprot/P40369 P40369]
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** [http://www.uniprot.org/uniprot/P50988 P50988]
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** [http://www.uniprot.org/uniprot/P73257 P73257]
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** [http://www.uniprot.org/uniprot/P50514 P50514]
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** [http://www.uniprot.org/uniprot/P04076 P04076]
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** [http://www.uniprot.org/uniprot/P04424 P04424]
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** [http://www.uniprot.org/uniprot/P20673 P20673]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Argininosuccinate lyase}}
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{{#set: ec number=EC-4.3.2.1}}
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{{#set: gene associated=Ec-12_005890}}
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{{#set: in pathway=PWY-5154|ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:57, 21 March 2018

Gene Ec-27_000400

  • left end position:
    • 291458
  • transcription direction:
    • POSITIVE
  • right end position:
    • 296553
  • centisome position:
    • 4.518794
  • Synonym(s):
    • Esi_0122_0061
    • Esi0122_0061
    • mGST

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11056&oldid=23138"