Difference between revisions of "RXN-12570"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Introns tRNA-Introns] == * common name: ** a tRNA intron with a 2',3'-cyclic phosphate and...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Introns tRNA-Introns] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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** 3-hydroxyacyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[3.1.27.9-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[K-HEXANOYL-COA]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[OH-HEXANOYL-COA]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxohexanoyl-CoA[c] '''=>''' 1 NAD+[c] '''+''' 1 (S)-3-hydroxyhexanoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_005290]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus}}
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* RHEA:
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{{#set: produced by=3.1.27.9-RXN}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Ec-14_006530|Ec-19_005290}}
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{{#set: in pathway=PWY-6863}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:58, 21 March 2018

Reaction RXN-12570

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 3-oxohexanoyl-CoA[c] => 1 NAD+[c] + 1 (S)-3-hydroxyhexanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12570&oldid=30616"