Difference between revisions of "RXN-15066"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] == * direction: ** REVERSIBLE * common name: ** galactokinase * ec n...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** formate assimilation into 5,10-methylenetetrahydrofolate
+
** galactokinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.6 EC-2.7.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[FORMATETHFLIG-RXN]]
+
** 1 [[ATP]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[ADP]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Ec-25_001900]]
+
** 1 ATP[c] '''+''' 1 &alpha;-D-galactose[c] '''<=>''' 1 H+[c] '''+''' 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 ADP[c]
−
*** [[Ec-01_009540]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-esiliculosus_genome]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
+
* Gene: [[Ec-04_000280]]
−
** 2 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-15_001370]]
+
*** Assignment: GO-TERM
−
*** [[Ec-14_004070]]
+
** Source: [[orthology-aragem]]
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Ec-04_004180]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
== Pathways  ==
−
** 3 associated gene(s):
+
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
−
*** [[Ec-14_004070]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
*** [[Ec-07_007470]]
+
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
−
*** [[Ec-15_001370]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
−
*** [[annotation-esiliculosus_genome]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
== Reaction(s) not found ==
+
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2157}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13553 13553]
−
{{#set: taxonomic range=TAX-2}}
+
* LIGAND-RXN:
−
{{#set: common name=formate assimilation into 5,10-methylenetetrahydrofolate}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
−
{{#set: reaction found=3}}
+
* UNIPROT:
−
{{#set: total reaction=3}}
+
** [http://www.uniprot.org/uniprot/P09608 P09608]
−
{{#set: completion rate=100.0}}
+
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
 +
** [http://www.uniprot.org/uniprot/P22713 P22713]
 +
** [http://www.uniprot.org/uniprot/P31767 P31767]
 +
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
 +
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
 +
** [http://www.uniprot.org/uniprot/P96993 P96993]
 +
** [http://www.uniprot.org/uniprot/P04385 P04385]
 +
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 +
** [http://www.uniprot.org/uniprot/P13227 P13227]
 +
** [http://www.uniprot.org/uniprot/P39574 P39574]
 +
** [http://www.uniprot.org/uniprot/P13045 P13045]
 +
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=galactokinase}}
 +
{{#set: ec number=EC-2.7.1.6}}
 +
{{#set: gene associated=Ec-04_000280|Ec-04_004180}}
 +
{{#set: in pathway=PWY-6317|PWY66-422|PWY-6527|PWY-3821}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:23, 21 March 2018

Reaction GALACTOKIN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • galactokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 α-D-galactose[c] <=> 1 H+[c] + 1 α-D-galactose 1-phosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15066&oldid=18137"