Difference between revisions of "RXN-15378"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-03_000880 == * left end position: ** 1092099 * transcription direction: ** POSITIVE * right end position: ** 1094949 * centisome position: ** 16.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-03_000880 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
−
* left end position:
+
* direction:
−
** 1092099
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
−
* right end position:
+
** SDH4, succinate dehydrogenase subunit 4
−
** 1094949
+
** SDH1, succinate dehydrogenase subunit 1
−
* centisome position:
+
** SDH3, succinate dehydrogenase subunit 3
−
** 16.727764   
+
** SDH2, succinate dehydrogenase subunit 2
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0027_0013
 
−
** Esi0027_0013
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[RXN-8668]]
+
* With identifiers:
 +
** 1 [[CPD-9612]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[CPD-15301]][c]
 +
* With common name(s):
 +
** 1 caldariellaquinone[c] '''+''' 1 succinate[c] '''=>''' 1 fumarate[c] '''+''' 1 caldariellaquinol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-07_007310]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-11_000360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_003640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-27_006560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-07_002870]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-21_003470]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1092099}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
−
{{#set: right end position=1094949}}
+
{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
−
{{#set: centisome position=16.727764    }}
+
{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
−
{{#set: common name=Esi_0027_0013|Esi0027_0013}}
+
{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
−
{{#set: reaction associated=RXN-8668}}
+
{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
 +
{{#set: ec number=EC-1.3.5.1}}
 +
{{#set: gene associated=Ec-07_007310|Ec-11_000360|Ec-05_003640|Ec-27_006560|Ec-07_002870|Ec-21_003470}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction RXN-15378

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
    • SDH4, succinate dehydrogenase subunit 4
    • SDH1, succinate dehydrogenase subunit 1
    • SDH3, succinate dehydrogenase subunit 3
    • SDH2, succinate dehydrogenase subunit 2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 caldariellaquinone[c] + 1 succinate[c] => 1 fumarate[c] + 1 caldariellaquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15378&oldid=24080"