Difference between revisions of "RXN-16630"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Treha...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16630 RXN-16630] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16630 RXN-16630] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
+
** NAD(P)-binding domain
−
** HAD-like domain
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[TREHALOSE-6P]][c] '''=>''' 1 [[TREHALOSE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3R-11Z-3-hydroxy-icos-11-enoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 α,α-trehalose 6-phosphate[c] '''=>''' 1 α,α-trehalose[c] '''+''' 1 phosphate[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R,11Z)-3-hydroxy-icos-11-enoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_003140]]
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* Gene: [[Ec-01_007100]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Ec-24_004390]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-08_005270]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-20_003980]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-11_002540]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-22_003320]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-19_005250]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-05_002680]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
+
* [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06228 R06228]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P31678 P31678]
 
−
** [http://www.uniprot.org/uniprot/P31688 P31688]
 
−
** [http://www.uniprot.org/uniprot/Q00786 Q00786]
 
−
** [http://www.uniprot.org/uniprot/P78875 P78875]
 
−
** [http://www.uniprot.org/uniprot/O64896 O64896]
 
−
** [http://www.uniprot.org/uniprot/O64897 O64897]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: common name=HAD-like domain}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: ec number=EC-3.1.3.12}}
+
{{#set: gene associated=Ec-01_007100}}
−
{{#set: gene associated=Ec-06_003140|Ec-24_004390|Ec-08_005270|Ec-20_003980|Ec-11_002540|Ec-22_003320|Ec-19_005250|Ec-05_002680}}
+
{{#set: in pathway=PWY-7663}}
−
{{#set: in pathway=TREHALOSESYN-PWY|PWY-881|TRESYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:42, 21 March 2018

Reaction RXN-16630

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7663, gondoate biosynthesis (anaerobic): PWY-7663
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16630&oldid=28794"