Difference between revisions of "RXN-7775"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-RXN 3-OXOACYL-ACP-SYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-RXN 3-OXOACYL-ACP-SYNTH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
−
** Beta-ketoacyl synthase, N-terminal
 
−
** Thiolase-like, subgroup
 
−
** beta-ketoacyl synthase, partial
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[B-KETOACYL-ACP]][c]
+
** 1 [[CPD-6994]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a malonyl-[acp][c] '''+''' 1 a 2,3,4-saturated fatty acyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxoacyl-[acp][c]
+
** 1 (2S)-eriodictyol[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 (+)-taxifolin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-27_003480]]
+
* Gene: [[Ec-19_002760]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Assignment: EC-NUMBER
+
* Gene: [[Ec-08_003510]]
−
* Gene: [[Ec-12_000650]]
+
** Source: [[orthology-aragem]]
−
** Source: [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-19_002750]]
−
*** Assignment: GO-TERM
+
** Source: [[orthology-aragem]]
−
* Gene: [[Ec-27_002090]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-12_000640]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
+
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P23902 P23902]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
−
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
+
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
+
−
** [http://www.uniprot.org/uniprot/P43710 P43710]
+
−
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
+
−
** [http://www.uniprot.org/uniprot/O67612 O67612]
+
−
** [http://www.uniprot.org/uniprot/P20582 P20582]
+
−
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
+
−
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
+
−
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
+
−
** [http://www.uniprot.org/uniprot/P43711 P43711]
+
−
** [http://www.uniprot.org/uniprot/O25284 O25284]
+
−
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
+
−
** [http://www.uniprot.org/uniprot/O34340 O34340]
+
−
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
+
−
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
+
−
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
+
−
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
+
−
** [http://www.uniprot.org/uniprot/P41175 P41175]
+
−
** [http://www.uniprot.org/uniprot/P31176 P31176]
+
−
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
+
−
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
+
−
** [http://www.uniprot.org/uniprot/P73283 P73283]
+
−
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
+
−
** [http://www.uniprot.org/uniprot/O64485 O64485]
+
−
** [http://www.uniprot.org/uniprot/O65677 O65677]
+
−
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
+
−
** [http://www.uniprot.org/uniprot/O23738 O23738]
+
−
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
+
−
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
+
−
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
+
−
** [http://www.uniprot.org/uniprot/O54440 O54440]
+
−
** [http://www.uniprot.org/uniprot/P55338 P55338]
+
−
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
+
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
+
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: ec number=EC-1.14.11.9}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: gene associated=Ec-19_002760|Ec-08_003510|Ec-19_002750}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: in pathway=PWY1F-823|PWY-6787}}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: gene associated=Ec-27_003480|Ec-12_000650|Ec-27_002090|Ec-12_000640}}
+
−
{{#set: in pathway=FASYN-ELONG-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:09, 21 March 2018

Reaction RXN-7775

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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