Difference between revisions of "RXN-9550"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9550 RXN-9550] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9550 RXN-9550] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** suberin monomers biosynthesis
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** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''6''' reaction(s) found
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* With identifiers:
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** [[RXN-1126]]
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** 1 [[Palmitoleoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-9245]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c]
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** [[6.2.1.34-RXN]]
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* With common name(s):
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** [[RXN-1104]]
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** 1 a palmitoleoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 palmitoleate[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c]
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** [[RXN-16418]]
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** [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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== Genes associated with this reaction  ==
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** [[RXN-16389]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-5366]], palmitoleate biosynthesis II (plants and bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5366 PWY-5366]
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* '''13''' reaction(s) not found
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666]
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12156 RXN-12156]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12157 RXN-12157]
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== Reconstruction information  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]
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* Category: [[gap-filling]]
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** [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
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*** Tool: [[meneco]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1103 RXN-1103]
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**** Comment: [[added for gapfilling]]
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** [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16416 RXN-16416]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16417 RXN-16417]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12155 RXN-12155]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
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** [http://metacyc.org/META/NEW-IMAGE?object=TYRAMINE-N-FERULOYLTRANSFERASE-RXN TYRAMINE-N-FERULOYLTRANSFERASE-RXN]
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== External links  ==
 
== External links  ==
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** [http://www.genome.jp/dbget-bin/www_bget?R08162 R08162]
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{{#set: taxonomic range=TAX-58023}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=suberin monomers biosynthesis}}
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{{#set: ec number=EC-3.1.2.14}}
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{{#set: reaction found=6}}
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{{#set: in pathway=PWY-5366|PWY-6282}}
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{{#set: reaction not found=13}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 20:18, 21 March 2018

Reaction RXN-9550

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a palmitoleoyl-[acp][c] + 1 H2O[c] => 1 palmitoleate[c] + 1 a holo-[acyl-carrier protein][c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-5366, palmitoleate biosynthesis II (plants and bacteria): PWY-5366
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




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