Difference between revisions of "RXN0-5419"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17365 CPD-17365] == * smiles: ** CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5419 RXN0-5419] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribosomal L11 methyltransfe...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17365 CPD-17365] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5419 RXN0-5419] ==
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* smiles:
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* direction:
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** CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QKBTYZDPVNTERQ-UWVCYPHHSA-J
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* common name:
 
* common name:
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** (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA
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** Ribosomal L11 methyltransferase, PrmA
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* molecular weight:
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** 1075.997   
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* Synonym(s):
 
* Synonym(s):
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyl-Coa
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-17116]]
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** 1 [[Nonmethylated-Ribosomal-Protein-L11s]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[Methylated-Ribosomal-Protein-L11s]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a non-methylated ribosomal protein L11[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a methylated ribosomal protein L11[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_003650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-26_000570]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-05_007000]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_001900]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72193701 72193701]
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{{#set: common name=Ribosomal L11 methyltransferase, PrmA}}
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* CHEBI:
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{{#set: gene associated=Ec-02_003650|Ec-26_000570|Ec-05_007000|Ec-20_001900}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76368 76368]
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{{#set: in pathway=}}
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{{#set: smiles=CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=QKBTYZDPVNTERQ-UWVCYPHHSA-J}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=1075.997    }}
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyl-Coa}}
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{{#set: produced by=RXN-17116}}
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Latest revision as of 20:13, 21 March 2018

Reaction RXN0-5419

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribosomal L11 methyltransferase, PrmA
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5419&oldid=25447"