Difference between revisions of "RXN1F-151"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-39119 TAX-39119]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
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** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-29197 TAX-29197]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38410 TAX-38410]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5747 TAX-5747]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2864 TAX-2864]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-877183 TAX-877183]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2833 TAX-2833]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2825 TAX-2825]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
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** photosynthesis light reactions
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[1.18.1.2-RXN]]
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** 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-03_002800]]
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** 1 γ-carotene[c] '''=>''' 1 all-trans-β-carotene[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Ec-24_002140]]
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*** [[Ec-05_006690]]
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** Source: [[orthology-aragem]]
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-10_006240]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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* [[PSII-RXN]]
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* Gene: [[Ec-00_005820]]
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** 1 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-02_005010]]
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* Gene: [[Ec-07_007260]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-24_002150]]
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== Reaction(s) not found ==
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15479 RXN-15479]
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* Gene: [[Ec-02_005510]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-00_005850]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* RHEA:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-101 PWY-101]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
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{{#set: taxonomic range=TAX-1117}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-39119}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
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{{#set: taxonomic range=TAX-38254}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-29197}}
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{{#set: ec number=EC-5.5.1.19}}
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{{#set: taxonomic range=TAX-38410}}
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{{#set: gene associated=Ec-24_002140|Ec-10_006240|Ec-00_005820|Ec-07_007260|Ec-24_002150|Ec-02_005510|Ec-00_005850}}
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{{#set: taxonomic range=TAX-5747}}
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{{#set: in pathway=PWY-5943}}
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{{#set: taxonomic range=TAX-2864}}
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{{#set: reconstruction category=orthology}}
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{{#set: taxonomic range=TAX-877183}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: taxonomic range=TAX-2836}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: taxonomic range=TAX-3027}}
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{{#set: taxonomic range=TAX-2830}}
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{{#set: taxonomic range=TAX-2833}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: taxonomic range=TAX-2763}}
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{{#set: taxonomic range=TAX-2870}}
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{{#set: taxonomic range=TAX-2825}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=photosynthesis light reactions}}
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{{#set: reaction found=3}}
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{{#set: total reaction=4}}
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{{#set: completion rate=75.0}}
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Latest revision as of 20:08, 21 March 2018

Reaction RXN1F-151

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 γ-carotene[c] => 1 all-trans-β-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5943, β-carotene biosynthesis: PWY-5943
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN1F-151&oldid=24765"