Difference between revisions of "RXN1G-72"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Arginine/Asparagine...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPH-RXN GPH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-phosphoglycolate phosphatase,...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPH-RXN GPH-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Arginine/Asparagine/Proline hydroxylase
+
** 2-phosphoglycolate phosphatase, eukaryotic
−
** Prolyl 4-hydroxylase, alpha subunit
+
** phosphoglycolate phosphatase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11.2 EC-1.14.11.2]
+
** [http://enzyme.expasy.org/EC/3.1.3.18 EC-3.1.3.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROCOLLAGEN-L-PROLINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-6321]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CPD-67]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCOLLATE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 a [procollagen]-L-proline[c] '''+''' 1 oxygen[c] '''=>''' 1 a [procollagen] trans 4-hyroxy-L-proline[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
+
** 1 2-phosphoglycolate[c] '''+''' 1 H2O[c] '''=>''' 1 glycolate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_004630]]
+
* [[Ec-12_008080]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
* [[Ec-12_005020]]
+
* [[Ec-28_001790]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***AUTOMATED-NAME-MATCH
+
***GO-TERM
−
* [[Ec-01_007120]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-06_002940]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-24_001040]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-23_001510]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-08_000690]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-11_002580]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-26_000290]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-08_002170]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-07_006010]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-12_001090]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14369 14369]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01334 R01334]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21195 P21195]
+
** [http://www.uniprot.org/uniprot/P40852 P40852]
−
** [http://www.uniprot.org/uniprot/Q10576 Q10576]
+
** [http://www.uniprot.org/uniprot/P40853 P40853]
−
** [http://www.uniprot.org/uniprot/P16924 P16924]
+
** [http://www.uniprot.org/uniprot/P32662 P32662]
−
** [http://www.uniprot.org/uniprot/P13674 P13674]
+
** [http://www.uniprot.org/uniprot/P73525 P73525]
−
** [http://www.uniprot.org/uniprot/P05307 P05307]
+
** [http://www.uniprot.org/uniprot/O33512 O33512]
−
** [http://www.uniprot.org/uniprot/P09102 P09102]
+
** [http://www.uniprot.org/uniprot/Q9S586 Q9S586]
−
** [http://www.uniprot.org/uniprot/P07237 P07237]
+
−
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
+
−
** [http://www.uniprot.org/uniprot/P04785 P04785]
+
−
** [http://www.uniprot.org/uniprot/P54001 P54001]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Arginine/Asparagine/Proline hydroxylase}}
+
{{#set: common name=2-phosphoglycolate phosphatase, eukaryotic}}
−
{{#set: common name=Prolyl 4-hydroxylase, alpha subunit}}
+
{{#set: common name=phosphoglycolate phosphatase}}
−
{{#set: ec number=EC-1.14.11.2}}
+
{{#set: ec number=EC-3.1.3.18}}
−
{{#set: gene associated=Ec-06_004630|Ec-12_005020|Ec-01_007120|Ec-06_002940|Ec-24_001040|Ec-23_001510|Ec-08_000690|Ec-11_002580|Ec-26_000290|Ec-08_002170|Ec-07_006010|Ec-12_001090}}
+
{{#set: gene associated=Ec-12_008080|Ec-28_001790}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-181}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 22:05, 17 March 2018

Reaction GPH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-phosphoglycolate phosphatase, eukaryotic
    • phosphoglycolate phosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-phosphoglycolate[c] + 1 H2O[c] => 1 glycolate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-181, photorespiration: PWY-181
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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