Difference between revisions of "TransportSeed CU+2"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CU+2 TransportSeed_CU+2] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CU+2 TransportSeed_CU+2] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
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−
** Ferrochelatase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.99.1.1 EC-4.99.1.1]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
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** 1.0 [[CU+2]][e] '''=>''' 1.0 [[CU+2]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 ferroheme b[c] '''+''' 2 H+[c] '''<=>''' 1 Fe2+[c] '''+''' 1 protoporphyrin IX[c]
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** 1.0 Cu2+[e] '''=>''' 1.0 Cu2+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
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* Gene: [[Ec-01_005360]]
 
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** Source: [[annotation-esiliculosus_genome]]
 
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*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* Category: [[orthology]]
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* Category: [[manual]]
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** Source: [[orthology-aragem]]
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** Source: [[manual-import_from_medium]]
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*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
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* Category: [[annotation]]
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−
** Source: [[annotation-esiliculosus_genome]]
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−
*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
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{{#set: in pathway=}}
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* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
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{{#set: reconstruction source=manual-import_from_medium}}
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* UNIPROT:
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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** [http://www.uniprot.org/uniprot/P22830 P22830]
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** [http://www.uniprot.org/uniprot/P22315 P22315]
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** [http://www.uniprot.org/uniprot/P28602 P28602]
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** [http://www.uniprot.org/uniprot/Q05338 Q05338]
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** [http://www.uniprot.org/uniprot/P42043 P42043]
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** [http://www.uniprot.org/uniprot/P23871 P23871]
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** [http://www.uniprot.org/uniprot/P32396 P32396]
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** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
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** [http://www.uniprot.org/uniprot/P56107 P56107]
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** [http://www.uniprot.org/uniprot/O67083 O67083]
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** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
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** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
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** [http://www.uniprot.org/uniprot/P22600 P22600]
+
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** [http://www.uniprot.org/uniprot/P43868 P43868]
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** [http://www.uniprot.org/uniprot/P16622 P16622]
+
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** [http://www.uniprot.org/uniprot/Q59735 Q59735]
+
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** [http://www.uniprot.org/uniprot/P43413 P43413]
+
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** [http://www.uniprot.org/uniprot/P54225 P54225]
+
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** [http://www.uniprot.org/uniprot/P42045 P42045]
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** [http://www.uniprot.org/uniprot/O64391 O64391]
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** [http://www.uniprot.org/uniprot/P42044 P42044]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ferrochelatase}}
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{{#set: ec number=EC-4.99.1.1}}
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{{#set: gene associated=Ec-01_005360}}
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{{#set: in pathway=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
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−
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:15, 21 March 2018

Reaction TransportSeed_CU+2

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Cu2+[e] => 1.0 Cu2+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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