Difference between revisions of "WATER"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] == * direction: ** LEFT-TO-RIGHT * common name: ** 71-hydroxychlorophyllide a mo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** riboflavin...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 71-hydroxychlorophyllide a monooxygenase
+
** riboflavin kinase
−
** chlorophyllide a oxygenase [overall]
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
 
* Synonym(s):
 
* Synonym(s):
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
−
** CAO
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[CPD-7015]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7014]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
+
** 1 [[RIBOFLAVIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 71-hydroxychlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''=>''' 1 chlorophyllide b[c] '''+''' 1 NADP+[c] '''+''' 2 H2O[c]
+
** 1 riboflavin[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 FMN[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-03_003240]]
+
* [[Ec-14_005260]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
***GO-TERM
−
* [[Ec-11_003750]]
+
* [[Ec-10_002950]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
***GO-TERM
−
* [[Ec-14_003590]]
+
* [[Ec-04_004280]]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-28_000110]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_002880]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_002840]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_002860]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
***GO-TERM
 +
* [[Ec-04_001490]]
 +
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 +
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 +
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=71-hydroxychlorophyllide a monooxygenase}}
+
{{#set: common name=riboflavin kinase}}
−
{{#set: common name=chlorophyllide a oxygenase [overall]}}
+
{{#set: ec number=EC-2.7.1.26}}
−
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
+
{{#set: gene associated=Ec-14_005260|Ec-10_002950|Ec-04_004280|Ec-04_001490}}
−
{{#set: gene associated=Ec-03_003240|Ec-11_003750|Ec-14_003590|Ec-28_000110|Ec-06_002880|Ec-06_002840|Ec-06_002860}}
+
{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
−
{{#set: in pathway=PWY-5068}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 22:28, 17 March 2018

Reaction RIBOFLAVINKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 riboflavin[c] + 1 ATP[c] => 1 ADP[c] + 1 FMN[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-366, flavin biosynthesis IV (mammalian): PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5523, 5,6-dimethylbenzimidazole biosynthesis I (aerobic): PWY-5523
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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