Difference between revisions of "PRFGS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PNP PNP] == * direction: ** REVERSIBLE * common name: ** Purine nucleoside phosphorylase * Synonym(...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRFGS PRFGS] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosylformylglycinamidine s...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PNP PNP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRFGS PRFGS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Purine nucleoside phosphorylase
+
** Phosphoribosylformylglycinamidine synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pi]][c] '''+''' 1.0 [[rnam]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[r1p]][c] '''+''' 1.0 [[ncam]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[fgam]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[gln__L]][c] '''=>''' 1.0 [[fpram]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[glu__L]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Phosphate[c] '''+''' 1.0 N Ribosylnicotinamide C11H15N2O5[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Nicotinamide[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 L-Glutamine[c] '''=>''' 1.0 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Glutamate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0187]]
+
* Gene: [[EF1784]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
* [[EF0186]]
+
* Gene: [[EF1782]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF1783]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 
−
** '''19''' reactions found over '''97''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:RXN0-7092
+
* RHEA:
−
* MetaNetX (MNX) Equation : MNXR103048
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
−
* KEGG Reaction : R02294
+
* MetaNetX (MNX) Equation : MNXR103165
−
* EC Number : 2.4.2
+
* EC Number : 6.3.5.3
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Purine nucleoside phosphorylase}}
+
{{#set: common name=Phosphoribosylformylglycinamidine synthase}}
−
{{#set: gene associated=EF0187|EF0186}}
+
{{#set: gene associated=EF1784|EF1782|EF1783}}
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
+
{{#set: in pathway=map01100|map01130|map01110|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:44, 21 March 2018

Reaction PRFGS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoribosylformylglycinamidine synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] + 1.0 H2O H2O[c] + 1.0 L-Glutamine[c] => 1.0 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine[c] + 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 L-Glutamate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR103165
  • EC Number : 6.3.5.3




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