Difference between revisions of "EF2614"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THRTRS THRTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Threonyl-tRNA synthetase * Synony...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] == * common_name: ** Carbon metabolism * Synonym(s): == Reaction(s) found == * '''...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/THRTRS THRTRS] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] ==
−
* direction:
+
* common_name:
−
** LEFT-TO-RIGHT
+
** Carbon metabolism
−
* common name:
+
−
** Threonyl-tRNA synthetase
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
* '''45''' reaction(s) found
−
** 1.0 [[thr__L]][c] '''+''' 1.0 [[trnathr]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[thrtrna]][c] '''+''' 1.0 [[amp]][c]
+
** [[GHMT2r]]
−
* With common name(s):
+
** [[SERAT]]
−
** 1.0 L-Threonine[c] '''+''' 1.0 TRNA(Thr)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 L-Threonyl-tRNA(Thr)[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** [[ME2]]
−
 
+
** [[CAT]]
−
== Genes associated with this reaction  ==
+
** [[ME1]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [[GND]]
−
* [[EF2858]]
+
** [[ACKr]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[GNK]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[FBP]]
−
== Pathways  ==
+
** [[HPYRRx]]
−
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
+
** [[MDH]]
−
** '''23''' reactions found over '''49''' reactions in the full pathway
+
** [[PTAr]]
−
== Reconstruction information  ==
+
** [[PGL]]
−
* [[orthology]]:
+
** [[PGM]]
−
** [[pantograph]]:
+
** [[PGK]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
** [[ALATA_L]]
−
*** [[l_plantarum_wcfs1]]
+
** [[PPS]]
 +
** [[PC]]
 +
** [[PGCD]]
 +
** [[RPE]]
 +
** [[GAPDi_nadp]]
 +
** [[PGLYCP]]
 +
** [[DDGLK]]
 +
** [[MSAR]]
 +
** [[GAPD]]
 +
** [[GLYCK2]]
 +
** [[ALDD1]]
 +
** [[TPI]]
 +
** [[ENO]]
 +
** [[GLYCK]]
 +
** [[ACACT1r]]
 +
** [[FTHFLi]]
 +
** [[PDH]]
 +
** [[ASPTA]]
 +
** [[MTHFC]]
 +
** [[MTHFD]]
 +
** [[GLYTA]]
 +
** [[EDA]]
 +
** [[TKT2]]
 +
** [[ACCOAC]]
 +
** [[PFK]]
 +
** [[FBA]]
 +
** [[PYK]]
 +
** [[GLYCTO1]]
 +
** [[CYSS]]
 +
== Reaction(s) not found ==
 +
* '''175''' reaction(s) not found
 +
** [http://bigg.ucsd.edu/universal/reactions/SUCOAS1m SUCOAS1m]
 +
** [http://bigg.ucsd.edu/universal/reactions/AKGDH AKGDH]
 +
** [http://bigg.ucsd.edu/universal/reactions/CS CS]
 +
** [http://bigg.ucsd.edu/universal/reactions/PSERT PSERT]
 +
** [http://bigg.ucsd.edu/universal/reactions/TAh TAh]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHC_nadp_hr MDHC_nadp_hr]
 +
** [http://bigg.ucsd.edu/universal/reactions/AACOAR_syn AACOAR_syn]
 +
** [http://bigg.ucsd.edu/universal/reactions/AKGDm AKGDm]
 +
** [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHym ICDHym]
 +
** [http://bigg.ucsd.edu/universal/reactions/G6PBDHh G6PBDHh]
 +
** [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
 +
** [http://bigg.ucsd.edu/universal/reactions/SAT SAT]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLYTA_1 GLYTA_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLYCTO1p GLYCTO1p]
 +
** [http://bigg.ucsd.edu/universal/reactions/FTHFLmi FTHFLmi]
 +
** [http://bigg.ucsd.edu/universal/reactions/RBCh_1 RBCh_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/MALSp MALSp]
 +
** [http://bigg.ucsd.edu/universal/reactions/MALSm MALSm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ME2m ME2m]
 +
** [http://bigg.ucsd.edu/universal/reactions/MALSh MALSh]
 +
** [http://bigg.ucsd.edu/universal/reactions/RBPCh RBPCh]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFR2_1 MTHFR2_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACONTm ACONTm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
 +
** [http://bigg.ucsd.edu/universal/reactions/SUCLm SUCLm]
 +
** [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
 +
** [http://bigg.ucsd.edu/universal/reactions/3HPPD 3HPPD]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACOAD1f ACOAD1f]
 +
** [http://bigg.ucsd.edu/universal/reactions/TMAMT TMAMT]
 +
** [http://bigg.ucsd.edu/universal/reactions/ME1m ME1m]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGLYCPx PGLYCPx]
 +
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
 +
** [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
 +
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGLYCPh PGLYCPh]
 +
** [http://bigg.ucsd.edu/universal/reactions/GHBDHy GHBDHy]
 +
** [http://bigg.ucsd.edu/universal/reactions/GHBDHx GHBDHx]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFC_1 MTHFC_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
 +
** [http://bigg.ucsd.edu/universal/reactions/FUM FUM]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHxm ICDHxm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACITL ACITL]
 +
** [http://bigg.ucsd.edu/universal/reactions/MALS MALS]
 +
** [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHhr ICDHhr]
 +
** [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
 +
** [http://bigg.ucsd.edu/universal/reactions/PCm PCm]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFDm MTHFDm]
 +
** [http://bigg.ucsd.edu/universal/reactions/FUMm FUMm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICL_1 ICL_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
 +
** [http://bigg.ucsd.edu/universal/reactions/SUCOASm SUCOASm]
 +
** [http://bigg.ucsd.edu/universal/reactions/RBPC RBPC]
 +
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/SER_AL SER_AL]
 +
** [http://bigg.ucsd.edu/universal/reactions/MCMMT MCMMT]
 +
** [http://bigg.ucsd.edu/universal/reactions/CSm CSm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGKm PGKm]
 +
** [http://bigg.ucsd.edu/universal/reactions/CYSS_1 CYSS_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGKh PGKh]
 +
** [http://bigg.ucsd.edu/universal/reactions/DHAK DHAK]
 +
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1 ECOAH1]
 +
** [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
 +
** [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT]
 +
** [http://bigg.ucsd.edu/universal/reactions/MMSAD3m MMSAD3m]
 +
** [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPDKh PPDKh]
 +
** [http://bigg.ucsd.edu/universal/reactions/CSp CSp]
 +
** [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
 +
** [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
 +
** [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
 +
** [http://bigg.ucsd.edu/universal/reactions/SPT_syn SPT_syn]
 +
** [http://bigg.ucsd.edu/universal/reactions/CITMCOALm CITMCOALm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
 +
** [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACS ACS]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
 +
** [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFR2 MTHFR2]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
 +
** [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L]
 +
** [http://bigg.ucsd.edu/universal/reactions/PRUK PRUK]
 +
** [http://bigg.ucsd.edu/universal/reactions/HBCHLR HBCHLR]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFD_1 MTHFD_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
 +
** [http://bigg.ucsd.edu/universal/reactions/GNKh GNKh]
 +
** [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
 +
** [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
 +
** [http://bigg.ucsd.edu/universal/reactions/MMM2 MMM2]
 +
** [http://bigg.ucsd.edu/universal/reactions/RBCh RBCh]
 +
** [http://bigg.ucsd.edu/universal/reactions/PYKf PYKf]
 +
** [http://bigg.ucsd.edu/universal/reactions/FDH FDH]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFDm_1 MTHFDm_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/PYKm PYKm]
 +
** [http://bigg.ucsd.edu/universal/reactions/HACD1 HACD1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHyr ICDHyr]
 +
** [http://bigg.ucsd.edu/universal/reactions/3HBCDm 3HBCDm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_hi MDH_nadp_hi]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFO MTHFO]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGLh PGLh]
 +
** [http://bigg.ucsd.edu/universal/reactions/MMEm MMEm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPCOACm PPCOACm]
 +
** [http://bigg.ucsd.edu/universal/reactions/SATm SATm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPCOAC PPCOAC]
 +
** [http://bigg.ucsd.edu/universal/reactions/SBP SBP]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLYPT GLYPT]
 +
** [http://bigg.ucsd.edu/universal/reactions/EDD EDD]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGLYDH PGLYDH]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFCx MTHFCx]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGDHh PGDHh]
 +
** [http://bigg.ucsd.edu/universal/reactions/MMMm MMMm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGKf PGKf]
 +
** [http://bigg.ucsd.edu/universal/reactions/MMSAD3 MMSAD3]
 +
** [http://bigg.ucsd.edu/universal/reactions/MME MME]
 +
** [http://bigg.ucsd.edu/universal/reactions/PSP PSP]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFCm MTHFCm]
 +
** [http://bigg.ucsd.edu/universal/reactions/SBP_1 SBP_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
 +
** [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
 +
** [http://bigg.ucsd.edu/universal/reactions/SSCOARy SSCOARy]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHyp ICDHyp]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACOA40OR ACOA40OR]
 +
** [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
 +
** [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
 +
** [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACOAD1fm ACOAD1fm]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
 +
** [http://bigg.ucsd.edu/universal/reactions/SGAT SGAT]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPDK PPDK]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACONTx ACONTx]
 +
** [http://bigg.ucsd.edu/universal/reactions/G6PBDH G6PBDH]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_fi MDH_nadp_fi]
 +
** [http://bigg.ucsd.edu/universal/reactions/PSP_Lpp PSP_Lpp]
 +
** [http://bigg.ucsd.edu/universal/reactions/SUCOAS SUCOAS]
 +
** [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
 +
** [http://bigg.ucsd.edu/universal/reactions/GNDer GNDer]
 +
** [http://bigg.ucsd.edu/universal/reactions/PDHm PDHm]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
 +
** [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLYCDH_1 GLYCDH_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICL ICL]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
 +
** [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
 +
** [http://bigg.ucsd.edu/universal/reactions/PRUK_1 PRUK_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/CATm CATm]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
 +
** [http://bigg.ucsd.edu/universal/reactions/CATp CATp]
 +
** [http://bigg.ucsd.edu/universal/reactions/SUCOAACTr SUCOAACTr]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPCKm PPCKm]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
 +
** [http://bigg.ucsd.edu/universal/reactions/FBA3 FBA3]
 +
** [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHy MDHy]
 +
** [http://bigg.ucsd.edu/universal/reactions/MTHFCm_1 MTHFCm_1]
 +
** [http://bigg.ucsd.edu/universal/reactions/PPCK PPCK]
 +
** [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
 +
** [http://bigg.ucsd.edu/universal/reactions/PGLer PGLer]
 +
** [http://bigg.ucsd.edu/universal/reactions/GAPDH_nadp_hi GAPDH_nadp_hi]
 +
** [http://bigg.ucsd.edu/universal/reactions/DMAMT DMAMT]
 +
** [http://bigg.ucsd.edu/universal/reactions/GAPDHm GAPDHm]
 +
** [http://bigg.ucsd.edu/universal/reactions/GAPDHh GAPDHh]
 +
** [http://bigg.ucsd.edu/universal/reactions/ACOAD1 ACOAD1]
 +
** [http://bigg.ucsd.edu/universal/reactions/GAPDHf GAPDHf]
 +
** [http://bigg.ucsd.edu/universal/reactions/ICDHx ICDHx]
 +
** [http://bigg.ucsd.edu/universal/reactions/PSAT PSAT]
 
== External links  ==
 
== External links  ==
−
* Reactome : REACT_R-HSA-380002
+
{{#set: common_name=Carbon metabolism}}
−
* MetaNetX (MNX) Equation : MNXR104848
+
{{#set: reaction found=45}}
−
* KEGG Reaction : R03663
+
{{#set: reaction not found=175}}
−
* EC Number : 6.1.1.3
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Threonyl-tRNA synthetase}}
+
−
{{#set: gene associated=EF2858}}
+
−
{{#set: in pathway=map00970}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Revision as of 15:39, 10 January 2018

Pathway map01200

  • common_name:
    • Carbon metabolism
  • Synonym(s):

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=EF2614&oldid=3261"