Difference between revisions of "PTPATi"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L ALATA_L] == * direction: ** REVERSIBLE * common name: ** L-alanine transaminase * Synonym(s...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pydx5p pydx5p] == * common name: ** Pyridoxal 5'-phosphate * Synonym(s): == Reaction(s) know...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L ALATA_L] ==
+
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pydx5p pydx5p] ==
* direction:
+
** REVERSIBLE
+
 
* common name:
 
* common name:
** L-alanine transaminase
+
** Pyridoxal 5'-phosphate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[biomass_LPL60]]
** 1.0 [[akg]][c] '''+''' 1.0 [[ala__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[pyr]][c]
+
* [[TransportSeed_pydx5p]]
* With common name(s):
+
* [[ALATA_D2]]
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Alanine[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Pyruvate[c]
+
* [[ALATA_L2]]
 
+
== Reaction(s) known to produce the compound ==
== Genes associated with this reaction  ==
+
* [[TransportSeed_pydx5p]]
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) of unknown directionality ==
* [[EF2372]]
+
* [[ExchangeSeed_pydx5p]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[EF1706]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[EF1314]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
== Pathways  ==
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
+
** '''12''' reactions found over '''65''' reactions in the full pathway
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
** '''111''' reactions found over '''715''' reactions in the full pathway
+
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
** '''25''' reactions found over '''80''' reactions in the full pathway
+
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
** '''50''' reactions found over '''220''' reactions in the full pathway
+
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
** '''83''' reactions found over '''228''' reactions in the full pathway
+
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
** '''27''' reactions found over '''93''' reactions in the full pathway
+
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
+
** '''16''' reactions found over '''71''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[e_coli_sstr_k12_substr_mg1655]]
+
 
== External links  ==
 
== External links  ==
* EC Number : 2.6.1.2
+
{{#set: common name=Pyridoxal 5'-phosphate}}
* BioCyc : META:ALANINE-AMINOTRANSFERASE-RXN
+
{{#set: consumed by=biomass_LPL60|TransportSeed_pydx5p|ALATA_D2|ALATA_L2}}
* MetaNetX (MNX) Equation : MNXR95698
+
{{#set: produced by=TransportSeed_pydx5p}}
* RHEA:
+
{{#set: consumed or produced by=ExchangeSeed_pydx5p}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19453 19453]
+
* Reactome : REACT_R-ATH-507749
+
* KEGG Reaction : R00258
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=L-alanine transaminase}}
+
{{#set: gene associated=EF2372|EF1706|EF1314}}
+
{{#set: in pathway=map01100|map00220|map01120|map01210|map01200|map01230|map00250|map00710}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+

Revision as of 17:13, 10 January 2018

Metabolite pydx5p

  • common name:
    • Pyridoxal 5'-phosphate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links