Difference between revisions of "FMNAT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI2 XYLI2] == * direction: ** REVERSIBLE * common name: ** Xylose isomerase * Synonym(s): == Rea...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pyr pyr] == * common name: ** Pyruvate * Synonym(s): == Reaction(s) known to consume the com...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI2 XYLI2] ==
+
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pyr pyr] ==
* direction:
+
** REVERSIBLE
+
 
* common name:
 
* common name:
** Xylose isomerase
+
** Pyruvate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[POX]]
** 1.0 [[glc__D]][c] '''<=>''' 1.0 [[fru]][c]
+
* [[AEPPT]]
* With common name(s):
+
* [[PFL]]
** 1.0 D-Glucose[c] '''<=>''' 1.0 D-Fructose[c]
+
* [[DHDPS]]
 
+
* [[PPS]]
== Genes associated with this reaction  ==
+
* [[PC]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[ACLS]]
* [[EF0556]]
+
* [[DXPS]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[PDH]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* [[ACHBS]]
== Pathways  ==
+
== Reaction(s) known to produce the compound ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[L_LACD2]]
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
* [[L_LACD3]]
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
+
* [[SHCHCS3]]
** '''15''' reactions found over '''54''' reactions in the full pathway
+
* [[SBTpts]]
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
+
* [[GLCpts]]
** '''22''' reactions found over '''63''' reactions in the full pathway
+
* [[ME1]]
== Reconstruction information  ==
+
* [[ME2]]
* [[orthology]]:
+
* [[SALCS]]
** [[pantograph]]:
+
* [[MANpts]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
* [[GAMpts]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
* [[SALSYN]]
 +
* [[DAPAL]]
 +
* [[ACGALpts_manual]]
 +
* [[FRUpts2]]
 +
* [[SALCpts]]
 +
* [[FRUpts]]
 +
* [[SERD_D]]
 +
* [[ALATA_L2]]
 +
* [[ACGApts]]
 +
* [[TRPAS1]]
 +
* [[SUCpts]]
 +
* [[ALATA_D2]]
 +
* [[TREpts]]
 +
* [[EDA]]
 +
* [[ARBTpts]]
 +
* [[OAADC]]
 +
* [[PYK]]
 +
* [[CELBpts]]
 +
* [[MNLpts]]
 +
* [[SERD_L]]
 +
* [[CYSTL]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[AGTi]]
 +
* [[DDPGALA]]
 +
* [[ALATA_L]]
 +
* [[LDH_D]]
 +
* [[2S6HCCi]]
 +
* [[LDH_L]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: common name=Pyruvate}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28546 28546]
+
{{#set: consumed by=POX|AEPPT|PFL|DHDPS|PPS|PC|ACLS|DXPS|PDH|ACHBS}}
* BioCyc : META:GLUCISOM-RXN
+
{{#set: produced by=L_LACD2|L_LACD3|SHCHCS3|SBTpts|GLCpts|ME1|ME2|SALCS|MANpts|GAMpts|SALSYN|DAPAL|ACGALpts_manual|FRUpts2|SALCpts|FRUpts|SERD_D|ALATA_L2|ACGApts|TRPAS1|SUCpts|ALATA_D2|TREpts|EDA|ARBTpts|OAADC|PYK|CELBpts|MNLpts|SERD_L|CYSTL}}
* MetaNetX (MNX) Equation : MNXR105254
+
{{#set: reversible reaction associated=AGTi|DDPGALA|ALATA_L|LDH_D|2S6HCCi|LDH_L}}
* KEGG Reaction : R00307
+
* EC Number : 5.3.1.5
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Xylose isomerase}}
+
{{#set: gene associated=EF0556}}
+
{{#set: in pathway=map01100|map00040|map00051}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 18:16, 18 March 2018

Metabolite pyr

  • common name:
    • Pyruvate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links