Difference between revisions of "TDPDRE"

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(Created page with "Category:Gene == Gene EF2579 == * Synonym(s): == Reactions associated == * DAPAL ** pantograph-e_coli_sstr_k12_substr_mg1655 * SERD_D ** pantograph-...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010] == * common_name: ** Glycolysis / Gluconeogenesis * Synonym(s): == Reaction(s) fou...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene EF2579 ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010] ==
 +
* common_name:
 +
** Glycolysis / Gluconeogenesis
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction(s) found ==
−
* [[DAPAL]]
+
'''24''' reactions found over '''149''' reactions in the full pathway
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[2HBO]]
−
* [[SERD_D]]
+
** 0 associated gene:
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** 1 reconstruction source(s) associated:
−
== Pathways associated ==
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
* [[map00260]]
+
* [[AB6PGH]]
 +
** 2 associated gene(s):
 +
*** [[EF1411]]
 +
*** [[EF0291]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ABUTD]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ALCD2x]]
 +
** 2 associated gene(s):
 +
*** [[EF0900]]
 +
*** [[EF1826]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ALDD2x]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ALDD2y]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[ENO]]
 +
** 1 associated gene(s):
 +
*** [[EF1961]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[FBA]]
 +
** 1 associated gene(s):
 +
*** [[EF1167]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[FBA2]]
 +
** 1 associated gene(s):
 +
*** [[EF1167]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[FBP]]
 +
** 1 associated gene(s):
 +
*** [[EF1503]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[G6PI]]
 +
** 1 associated gene(s):
 +
*** [[EF1416]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GAPD]]
 +
** 2 associated gene(s):
 +
*** [[EF1526]]
 +
*** [[EF1964]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GAPDi_nadp]]
 +
** 2 associated gene(s):
 +
*** [[EF1964]]
 +
*** [[EF1526]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[GLYALDDr]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[HEX1]]
 +
** 1 associated gene(s):
 +
*** [[EF2788]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[LDH_L]]
 +
** 1 associated gene(s):
 +
*** [[EF0255]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PDH]]
 +
** 4 associated gene(s):
 +
*** [[EF1353]]
 +
*** [[EF1356]]
 +
*** [[EF1355]]
 +
*** [[EF1354]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PFK]]
 +
** 4 associated gene(s):
 +
*** [[EF1045]]
 +
*** [[EF1806]]
 +
*** [[EF0718]]
 +
*** [[EF0693]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PFK_3]]
 +
** 1 associated gene(s):
 +
*** [[EF1045]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[PGI]]
 +
** 1 associated gene(s):
 +
*** [[EF1416]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PGK]]
 +
** 1 associated gene(s):
 +
*** [[EF1963]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PGM]]
 +
** 2 associated gene(s):
 +
*** [[EF2664]]
 +
*** [[EF0195]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[PYK]]
 +
** 1 associated gene(s):
 +
*** [[EF1046]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[TPI]]
 +
** 1 associated gene(s):
 +
*** [[EF1962]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHOXPEGOX 34DHOXPEGOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHPLACOX_NADP 34DHPLACOX_NADP]
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX 34DHXMANDACOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX_NADP 34DHXMANDACOX_NADP]
 +
* [http://bigg.ucsd.edu/universal/reactions/3M4HDXPAC 3M4HDXPAC]
 +
* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX 3MOX4HOXPGALDOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX_NADP 3MOX4HOXPGALDOX_NADP]
 +
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/4HOXPACDOX_NADP 4HOXPACDOX_NADP]
 +
* [http://bigg.ucsd.edu/universal/reactions/4MOPDC 4MOPDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/6PHBG 6PHBG]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACCOAL ACCOAL]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACGAL1PPpp ACGAL1PPpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACGAM1PPpp ACGAM1PPpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACS ACS]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGPOP AGPOP]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGPOPm AGPOPm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD22xi ALCD22xi]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD22xim ALCD22xim]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD23xi ALCD23xi]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD23xim ALCD23xim]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD2ir ALCD2ir]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD2irm ALCD2irm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCDH_nadp_hi ALCDH_nadp_hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD19x_P ALDD19x_P]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD19xr ALDD19xr]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20y ALDD20y]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20ym ALDD20ym]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD22x ALDD22x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
 +
* [http://bigg.ucsd.edu/universal/reactions/CHOLD CHOLD]
 +
* [http://bigg.ucsd.edu/universal/reactions/DAPOP DAPOP]
 +
* [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
 +
* [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBA3 FBA3]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
 +
* [http://bigg.ucsd.edu/universal/reactions/G1PP G1PP]
 +
* [http://bigg.ucsd.edu/universal/reactions/G1PPpp G1PPpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PP G6PP]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PPer G6PPer]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALM2 GALM2]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALM2pp GALM2pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDH_nadp_hi GAPDH_nadp_hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHf GAPDHf]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHh GAPDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHm GAPDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCC2cm GCC2cm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCCc GCCc]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCCcm GCCcm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GK_adp GK_adp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/GTPOPm GTPOPm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GULND GULND]
 +
* [http://bigg.ucsd.edu/universal/reactions/GULNDer GULNDer]
 +
* [http://bigg.ucsd.edu/universal/reactions/GalMr GalMr]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
 +
* [http://bigg.ucsd.edu/universal/reactions/LDH_Lm LDH_Lm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LLDHh LLDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/MCLORi MCLORi]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDCh PDCh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDCm PDCm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHa PDHa]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam1hi PDHam1hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam1mi PDHam1mi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam2hi PDHam2hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam2mi PDHam2mi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHbr PDHbr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHcr PDHcr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe2hr PDHe2hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe2r PDHe2r]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe3hr PDHe3hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHm PDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PEPCKm PEPCKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_ppi PFK_ppi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGCM PGCM]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKf PGKf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKh PGKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKm PGKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGMTh PGMTh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCK PPCK]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCKm PPCKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK2 PYK2]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK3 PYK3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK4 PYK4]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK5 PYK5]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYKf PYKf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYKm PYKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYRDC PYRDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYRDC_1 PYRDC_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=DAPAL|SERD_D}}
+
{{#set: common_name=Glycolysis / Gluconeogenesis}}
−
{{#set: pathway associated=map00260}}
+
{{#set: reaction found=24}}
 +
{{#set: total reaction=149}}
 +
{{#set: completion rate=16.0}}

Revision as of 18:27, 18 March 2018

Pathway map00010

  • common_name:
    • Glycolysis / Gluconeogenesis
  • Synonym(s):

Reaction(s) found

24 reactions found over 149 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=TDPDRE&oldid=7312"