Difference between revisions of "FAS140"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/dhor__S dhor__S] == * common name: ** (S)-Dihydroorotate * Synonym(s): == Reaction(s) known...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK1 NDPK1] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:GDP...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/dhor__S dhor__S] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK1 NDPK1] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** (S)-Dihydroorotate
+
** Nucleoside-diphosphate kinase (ATP:GDP)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1.0 [[atp]][c] '''+''' 1.0 [[gdp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[gtp]][c]
−
* [[DHORDi]]
+
* With common name(s):
−
* [[DHORTS]]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 GTP C10H12N5O14P3[c]
−
* [[DHORD_NAD]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0228]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF1036]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=(S)-Dihydroorotate}}
+
* RHEA:
−
{{#set: consumed or produced by=DHORDi|DHORTS|DHORD_NAD}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27686 27686]
 +
* BioCyc : META:GDPKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR96119
 +
* KEGG Reaction : R00330
 +
* EC Number : 2.7.4.6
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Nucleoside-diphosphate kinase (ATP:GDP)}}
 +
{{#set: gene associated=EF0228|EF1036}}
 +
{{#set: in pathway=map01100|map01130|map01110|map00240|map00230}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:38, 18 March 2018

Reaction NDPK1

  • direction:
    • REVERSIBLE
  • common name:
    • Nucleoside-diphosphate kinase (ATP:GDP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 GDP C10H12N5O11P2[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 GTP C10H12N5O14P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GDPKIN-RXN
  • MetaNetX (MNX) Equation : MNXR96119
  • KEGG Reaction : R00330
  • EC Number : 2.7.4.6




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=FAS140&oldid=7826"