Difference between revisions of "Manual"

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Latest revision as of 15:47, 21 March 2018

 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
ACGALpts manualManualManual-4 newreactionsManual curationEF2267OREF0628ANDEF3042OREF0628ANDEF3043OREF0628ANDEF3045OREF0628ANDEF0709ANDEF0710
ADPDS manualManualManual-4 newreactionsManual curationEF1134
AEPPT2 aminoethylphosphonate pyruvate transaminaseOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2994
AGAT LPL1 Acyl glycerol 3 phosphate acyltransferase Lb plantarum specificOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2691
AHMMPS LPL4 amino 5 hydroxymethyl 2 methylpyrimidine synthetaseOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF3255
ALALACD alanine D lactate ligase reversibleOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF0843
ALAt2pp copy1L-alanine transport in via proton symport (periplasm)Orthology
Manual		PantographOrthology-e coli sstr k12 substr mg1655
Manual-curation from orthology		EF1103
ASPt2pp copy1L-aspartate transport in via proton symport (periplasm)Orthology
Manual		PantographOrthology-e coli sstr k12 substr mg1655
Manual-curation from orthology		EF0387
Biomass LPL60ManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
CD2t3pppeManualManual-1 new rxn for biomassThis was a reaction occurring in the perisplasm of e. coliEF0859
CLPNS LPLCardiolipin Synthase LPL specificOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF1608
CLPNS140Cardiolipin synthase (n-C14:0)ManualManual-2 reaction to add deleteThis was a reaction occurring in the perisplasm of e. coliEF1608
EF0631
CLPNS141ppcManualManual-1 new rxn for biomassThis was a reaction occurring in the perisplasm of e. coliEF1608
EF0631
CLPNS161Cardiolipin synthase (n-C16:1)ManualManual-2 reaction to add deleteThis was a reaction occurring in the perisplasm of e. coliEF0631
EF1608
CLPNS180Cardiolipin synthase (n-C18:0)ManualManual-2 reaction to add deleteThis was a reaction occurring in the perisplasm of e. coliEF0631
EF1608
CO2tCO2 transporter via diffusionManualManual-2 reaction to add deleteReaction added for biomass
COBALT2abcpppeManualManual-1 new rxn for biomassThis was a reaction occurring in the perisplasm of e. coliEF1400
COBALT2t3pppeManualManual-1 new rxn for biomassThis was a reaction occurring in the perisplasm of e. coliEF0859
CPSS LPL2ManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
CRCTCTPD ribitol 5 phosphate cytidylyltransferaseOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2172
CYSTGL 1Cystathionine g lyaseOrthology
Manual		PantographManual-curation from orthology
Orthology-b subtilis subsp subtilis str168		EF0290
CYSTS 2Cystathionine b synthaseOrthology
Manual		PantographManual-curation from orthology
Orthology-b subtilis subsp subtilis str168		EF0289
CYSabc2pppeManualManual-1 new rxn for biomassThis was a reaction occurring in the perisplasm of e. coliEF2058
EF2059
CYTBDCytochrome oxidase bd (ubiquinol-8: 2 protons)ManualManual-2 reaction to add deleteThis was a reaction occurring in the perisplasm of e. coliEF2061
EF2060
DAGGT LPL1 2 diacylglycerol 3 glucosyltransferase LPL specificOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2891
EF2890
DAGK LPLDiacylglycerol kinase LPL specificOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2411
DALTALD Alanine lipoteichoic acid ligaseOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2749
EF2746
EF2748
EF2747
DARTALD Alanine ribitol teichoic acid ligaseOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2748
EF2746
EF2749
EF2747
DASYN LPLCDP Diacylglycerol synthetase LPL specificOrthology
Manual		PantographManual-curation from orthology
Orthology-l plantarum wcfs1		EF2494
DHFOR2Dihydrofolate reductaseOrthology
Manual		PantographManual-curation from orthology
Orthology-b subtilis subsp subtilis str168		EF1577
DNAS LPLManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
EX co2ManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
EX lac LManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
EX piManualManual-1 new rxn for biomassReaction added for biomass, from model l.plantarum
ExchangeSeed 4abzManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed adeManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed adocblManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ala LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed arg LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ascb LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed asn LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed asp LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed btnManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed citManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed cys LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed gln LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed glu LManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed glyManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed guaManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed h2oManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
... further results
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