Difference between revisions of "LYXI"

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(Created page with "Category:Gene == Gene EF2456 == * Synonym(s): == Reactions associated == * PC ** pantograph-l_plantarum_wcfs1 ** pantograph-b_subtilis_subsp_subtilis_st...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620] == * common_name: ** Pyruvate metabolism * Synonym(s): == Reaction(s) found == ''...")
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−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene EF2456 ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620] ==
 +
* common_name:
 +
** Pyruvate metabolism
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction(s) found ==
 +
'''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[2HBO]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[ABUTD]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ACACT1r]]
 +
** 1 associated gene(s):
 +
*** [[EF1364]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ACALD]]
 +
** 1 associated gene(s):
 +
*** [[EF0900]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ACCOAC]]
 +
** 5 associated gene(s):
 +
*** [[EF2877]]
 +
*** [[EF2876]]
 +
*** [[EF2879]]
 +
*** [[EF3240]]
 +
*** [[EF2875]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ACKr]]
 +
** 1 associated gene(s):
 +
*** [[EF1983]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ACYP_2]]
 +
** 1 associated gene(s):
 +
*** [[EF2401]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ALDD2x]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ALDD2y]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[GLYALDDr]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[GLYCLTDx]]
 +
** 1 associated gene(s):
 +
*** [[EF3141]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[GLYCLTDy]]
 +
** 1 associated gene(s):
 +
*** [[EF3141]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[IPPS]]
 +
** 1 associated gene(s):
 +
*** [[EF3317]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[LALDO2x]]
 +
** 1 associated gene(s):
 +
*** [[EF1358]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[LCADi]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[LDH_D]]
 +
** 1 associated gene(s):
 +
*** [[EF2295]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[LDH_L]]
 +
** 1 associated gene(s):
 +
*** [[EF0255]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[L_LACD2]]
 +
** 3 associated gene(s):
 +
*** [[EF1110]]
 +
*** [[EF1109]]
 +
*** [[EF1108]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[L_LACD3]]
 +
** 3 associated gene(s):
 +
*** [[EF1108]]
 +
*** [[EF1109]]
 +
*** [[EF1110]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[MDH]]
 +
** 3 associated gene(s):
 +
*** [[EF0641]]
 +
*** [[EF0255]]
 +
*** [[EF0388]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ME1]]
 +
** 1 associated gene(s):
 +
*** [[EF3316]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ME2]]
 +
** 2 associated gene(s):
 +
*** [[EF1206]]
 +
*** [[EF3316]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[OAADC]]
 +
** 1 associated gene(s):
 +
*** [[EF3134]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[OBTFL]]
 +
** 2 associated gene(s):
 +
*** [[EF1612]]
 +
*** [[EF1613]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
* [[PC]]
 
* [[PC]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
*** [[EF2456]]
−
== Pathways associated ==
+
** 2 reconstruction source(s) associated:
−
* [[map01100]]
+
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[map01200]]
+
*** [[orthology-l_plantarum_wcfs1]]
−
* [[map01120]]
+
* [[PDH]]
−
* [[map00720]]
+
** 4 associated gene(s):
−
* [[map00620]]
+
*** [[EF1353]]
−
* [[map01230]]
+
*** [[EF1356]]
−
* [[map00020]]
+
*** [[EF1355]]
 +
*** [[EF1354]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PFL]]
 +
** 2 associated gene(s):
 +
*** [[EF1612]]
 +
*** [[EF1613]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PPS]]
 +
** 1 associated gene(s):
 +
*** [[EF1024]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PTA2]]
 +
** 1 associated gene(s):
 +
*** [[EF0949]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[PTAr]]
 +
** 1 associated gene(s):
 +
*** [[EF0949]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PYK]]
 +
** 1 associated gene(s):
 +
*** [[EF1046]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT2r ACACT2r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT3r ACACT3r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT4r ACACT4r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACACT7r ACACT7r]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACALDh ACALDh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACCOAC_1 ACCOAC_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACCOAL ACCOAL]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACOAH ACOAH]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACOAHim ACOAHim]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACPh ACPh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACS ACS]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACYP ACYP]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGPOP AGPOP]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGPOPm AGPOPm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALR ALR]
 +
* [http://bigg.ucsd.edu/universal/reactions/APhi APhi]
 +
* [http://bigg.ucsd.edu/universal/reactions/DAPOP DAPOP]
 +
* [http://bigg.ucsd.edu/universal/reactions/DMALRED DMALRED]
 +
* [http://bigg.ucsd.edu/universal/reactions/FUM FUM]
 +
* [http://bigg.ucsd.edu/universal/reactions/FUMm FUMm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCC2cm GCC2cm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCCc GCCc]
 +
* [http://bigg.ucsd.edu/universal/reactions/GCCcm GCCcm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYCLTDym GLYCLTDym]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYOX3 GLYOX3]
 +
* [http://bigg.ucsd.edu/universal/reactions/GTPOPm GTPOPm]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
 +
* [http://bigg.ucsd.edu/universal/reactions/IPPSh IPPSh]
 +
* [http://bigg.ucsd.edu/universal/reactions/IPPSm IPPSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
 +
* [http://bigg.ucsd.edu/universal/reactions/LALDO3 LALDO3]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCADi_D LCADi_D]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCADi_Dm LCADi_Dm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LDH_Lm LDH_Lm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LDHm LDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LLDHh LLDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/LO LO]
 +
* [http://bigg.ucsd.edu/universal/reactions/L_LACDcm L_LACDcm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LacR LacR]
 +
* [http://bigg.ucsd.edu/universal/reactions/MACCOAT MACCOAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/MALS MALS]
 +
* [http://bigg.ucsd.edu/universal/reactions/MALSh MALSh]
 +
* [http://bigg.ucsd.edu/universal/reactions/MALSm MALSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MALSp MALSp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MCLORi MCLORi]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHC_nadp_hr MDHC_nadp_hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_fi MDH_nadp_fi]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_hi MDH_nadp_hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHy MDHy]
 +
* [http://bigg.ucsd.edu/universal/reactions/ME1m ME1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ME2m ME2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/MOSDC MOSDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/MOX MOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCFPTh PCFPTh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCFPTm PCFPTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCm PCm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHa PDHa]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam1hi PDHam1hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam1mi PDHam1mi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam2hi PDHam2hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHam2mi PDHam2mi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHbr PDHbr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHcr PDHcr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe2hr PDHe2hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe2r PDHe2r]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHe3hr PDHe3hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PDHm PDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PEPCKm PEPCKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFLACTm PFLACTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFLh PFLh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCK PPCK]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCKm PPCKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCSCT PPCSCT]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPDK PPDK]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPDKh PPDKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK2 PYK2]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK3 PYK3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK4 PYK4]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYK5 PYK5]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYKf PYKf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYKm PYKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/SUCOAACTr SUCOAACTr]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=PC}}
+
{{#set: common_name=Pyruvate metabolism}}
−
{{#set: pathway associated=map01100|map01200|map01120|map00720|map00620|map01230|map00020}}
+
{{#set: reaction found=31}}
 +
{{#set: total reaction=163}}
 +
{{#set: completion rate=19.0}}

Revision as of 18:28, 18 March 2018

Pathway map00620

  • common_name:
    • Pyruvate metabolism
  • Synonym(s):

Reaction(s) found

31 reactions found over 163 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=LYXI&oldid=7352"