Difference between revisions of "Manual-import from medium"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/COBALT2abcpppe COBALT2abcpppe] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula...")
 
(Created page with "{{#ask: Category:Reaction reconstruction category::gap-filling | ?common name | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruction source |...")
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[[Category:Reaction]]
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{{#ask: [[Category:Reaction]] [[reconstruction category::gap-filling]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/COBALT2abcpppe COBALT2abcpppe] ==
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| ?common name
* direction:
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| ?ec number
** LEFT-TO-RIGHT
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| ?reconstruction category
* Synonym(s):
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| ?reconstruction tool
 
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| ?reconstruction source
== Reaction Formula ==
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| ?gene associated
* With identifiers:
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| ?in pathway
** 1.0 [[cobalt2]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[cobalt2]][e] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c]
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}}
* With common name(s):
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** 1.0 Co2+[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Co2+[e] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF1400]]
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** MANUAL
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== Pathways  ==
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== Reconstruction information  ==
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* [[manual]]:
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** [[this was a reaction occurring in the perisplasm of e. coli]]
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== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: gene associated=EF1400}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
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Revision as of 17:20, 10 January 2018

 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceGene associatedIn pathway
2HBO2 HydroxybutyrateNAD oxidoreductaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map01110
Map00640
Map01120
Map00270
Map00620
Map00010
Map01130
AASAD3L-aminoadipate-semialdehyde dehydrogenase (NADH)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00310
Map01110
Map00300
Map01230
Map01130
AASDH1 cL-aminoadipate-semialdehyde dehydrogenase (NADPH)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
AASS cAminoadipic semialdehyde synthaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
ACGSN-acetylglutamate synthaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00220
Map01110
Map01210
Map01230
Map01130
ACONTAconitate hydrataseGap-fillingMenecoAdded for gapfillingMap01100
Map00630
Map01110
Map01120
Map01210
Map00720
Map01230
Map01200
Map00020
Map01130
ACONTaAconitase (half-reaction A, Citrate hydro-lyase)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00630
Map01110
Map01120
Map01210
Map00720
Map00020
Map01130
ACONTbAconitase (half-reaction B, Isocitrate hydro-lyase)Gap-fillingMenecoAdded for gapfillingMap01100
Map00630
Map01110
Map01120
Map01210
Map00720
Map00020
Map01130
ACP1 FMNAcid phosphatase (FMN)Gap-fillingMenecoAdded for gapfillingMap01100
Map00740
ADMDCAdenosylmethionine decarboxylaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00270
Map00330
AGTiAlanine glyoxylate aminotransferase irreversibleGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap00250
Map00270
Map01110
Map01100
Map00260
AMAOTrAdenosylmethionine-8-amino-7-oxononanoate transaminaseGap-fillingMenecoAdded for gapfillingMap01100
Map00780
ANPRTAnthranilate phosphoribosyltransferaseGap-fillingMenecoAdded for gapfillingMap01100
Map01130
Map00400
Map01110
Map01230
ANSAnthranilate synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map01110
Map01230
Map01130
Map00400
Map00405
ANS2Anthranilate synthase 2Gap-fillingMenecoAdded for gapfillingMap01100
Map01130
Map00400
Map01110
Map00405
AOXSr8-amino-7-oxononanoate synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map00780
Map01120
ARGSLArgininosuccinate lyaseGap-fillingMenecoAdded for gapfillingMap01100
Map00220
Map01110
Map01230
Map00250
Map01130
ARGSSArgininosuccinate synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map00220
Map01110
Map01230
Map00250
Map01130
ARGSS 1Argininosuccinate synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map00220
Map01110
Map01230
Map00250
Map01130
ASNS1Asparagine synthase (glutamine-hydrolysing)Gap-fillingMenecoAdded for gapfillingMap01100
Map00250
Map01110
ASNS2Asparagine synthetaseGap-fillingMenecoAdded for gapfillingMap01100
Map00460
Map00250
Map01110
ATPPRTATP phosphoribosyltransferaseGap-fillingMenecoAdded for gapfillingMap01100
Map00340
Map01110
Map01230
Aratyr1Aromatic amino acid aminotransferase tyrosineGap-fillingMenecoAdded for gapfilling
Aratyr2Aromatic amino acid aminotransferase tyrosineGap-fillingMenecoAdded for gapfilling
Aratyr3Aromatic amino acid aminotransferase tyrosineGap-fillingMenecoAdded for gapfilling
Aratyr4Aromatic amino acid aminotransferase tyrosineGap-fillingMenecoAdded for gapfilling
BLUBCobalamin biosynthesisGap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
BTS2Biotin synthase (ala-L producing)Gap-fillingMenecoAdded for gapfilling
BTS6Biotin synthaseGap-fillingMenecoAdded for gapfilling
BZDHBenzaldehyde dehydrogenaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map01220
Map01120
Map00627
Map00622
Map00623
Map00350
CHCOAL6-carboxyhexanoate-CoA ligaseGap-fillingMenecoAdded for gapfillingMap01100
Map00780
CKcATP Creatine kinase (c)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00330
CKc choATP Creatine kinase (c)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
CRTNsynCreatinine synthaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00330
CRTNsyn choCreatinine synthaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
CSCitrate synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map00630
Map01110
Map01120
Map01210
Map01200
Map01230
Map00020
Map01130
CSPMDDCCarboxynorspermidine decarboxylaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00330
CSPMDDHCarboxyspermidine dehydrogenaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00330
DBRCDimethylbenzimidazole-riboflavin conversionGap-fillingMenecoAdded for gapfilling
DBTSDethiobiotin synthaseGap-fillingMenecoAdded for gapfillingMap01100
Map00780
DHAD1Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)Gap-fillingMenecoAdded for gapfillingMap01100
Map01110
Map00770
Map00290
Map01210
Map01230
Map01130
DHAD2Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)Gap-fillingMenecoAdded for gapfillingMap01100
Map01110
Map00770
Map00290
Map01210
Map01230
Map01130
DMBZIDS25,6-dimethylbenzimidazole synthaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
FAS100Fatty acid synthase n C100Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00061
FAS120Fatty acid synthase n C120Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00061
FAS140Fatty acid synthase n C140Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00061
FAS80 LFatty acid synthase n C80 lumped reactionGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00061
G5SADsL-glutamate 5-semialdehyde dehydratase (spontaneous)Gap-fillingMenecoAdded for gapfillingMap01100
Map01110
Map00330
Map00332
Map01230
Map01130
GACMTRcGuanidinoacetate N-methyltransferase (c)Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumMap01100
Map00330
Map00260
GGCLUT2Glutathione-specific gamma-glutamylcyclotransferaseGap-fillingMenecoGap-filling-gapfilling solution with meneco draft medium
... further results