3.5.1.98-RXN

Reaction 3.5.1.98-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-3.5.1.98
• common name:
  • histone deacetylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Histone-Acetyl-Lysine[c] + 1 WATER[c] => 1 Histone-L-lysine[c] + 1 ACET[c]
• With common name(s):
  • 1 a [histone]-N6-acetyl-L-lysine[c] + 1 H2O[c] => 1 a [histone]-L-lysine[c] + 1 acetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ14812
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ15906
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ02774
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ20903
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ18535
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05294
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ22263
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ10893
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ06568
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ05293
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05295
  • Source: orthology-ectocarpus_siliculosus

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools