RXN-13186

Reaction RXN-13186

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-1.14.11.27
• common name:
  • histone demethylase activity (H3-K36 specific)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-8900[c] + 2 2-KETOGLUTARATE[c] + 2 OXYGEN-MOLECULE[c] + 1 PROTON[c] => 1 Protein-L-lysine[c] + 2 SUC[c] + 2 CARBON-DIOXIDE[c] + 2 FORMALDEHYDE[c]
• With common name(s):
  • 1 a [protein] N6,N6-dimethyl-L-lysine[c] + 2 2-oxoglutarate[c] + 2 oxygen[c] + 1 H+[c] => 1 a [protein]-L-lysine[c] + 2 succinate[c] + 2 CO2[c] + 2 formaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ18735
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ13421
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05371
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ19354
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00708
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ19102
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Reconstruction information

• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 42033
• LIGAND-RXN:
  • R10056