RXN-9839

Reaction RXN-9839

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-5.1.3.37
• common name:
  • mannuronan C-5 epimerase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Poly-beta-D-Mannuronate[c] => 1 ALGINATE[c]
• With common name(s):
  • 1 mannuronan[c] => 1 alginate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ22247
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ02850
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ19056
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05197
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05196
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ15734
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ07100
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ18882
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05198
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ10981
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ03359
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ08627
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-6073, alginate biosynthesis I (algal): PWY-6073
  • 3 reactions found over 3 reactions in the full pathway
• PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
  • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools