Difference between revisions of "VALDEG-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TA...") |
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| Line 11: | Line 11: | ||
== Reaction(s) found == | == Reaction(s) found == | ||
| − | ''' | + | '''6''' reactions found over '''8''' reactions in the full pathway |
* [[1.2.1.25-RXN]] | * [[1.2.1.25-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[SJ11017]] | *** [[SJ11017]] | ||
| − | ** | + | ** 1 reconstruction source(s) associated: |
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]] | * [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
| − | |||
| − | |||
*** [[SJ07211]] | *** [[SJ07211]] | ||
| + | *** [[SJ14331]] | ||
*** [[SJ16180]] | *** [[SJ16180]] | ||
| − | *** [[ | + | *** [[SJ03584]] |
| + | *** [[SJ21390]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]] | * [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]] | ||
** 11 associated gene(s): | ** 11 associated gene(s): | ||
| + | *** [[SJ16590]] | ||
| + | *** [[SJ21390]] | ||
| + | *** [[SJ22164]] | ||
| + | *** [[SJ00040]] | ||
*** [[SJ11169]] | *** [[SJ11169]] | ||
*** [[SJ22166]] | *** [[SJ22166]] | ||
*** [[SJ04418]] | *** [[SJ04418]] | ||
| − | *** [[ | + | *** [[SJ14130]] |
| − | *** [[ | + | *** [[SJ14591]] |
*** [[SJ03913]] | *** [[SJ03913]] | ||
*** [[SJ07211]] | *** [[SJ07211]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
*** [[orthology-nannochloropsis_salina]] | *** [[orthology-nannochloropsis_salina]] | ||
| Line 52: | Line 47: | ||
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]] | * [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
| − | |||
*** [[SJ17677]] | *** [[SJ17677]] | ||
| + | *** [[SJ06412]] | ||
| + | *** [[SJ04586]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [[METHYLACYLYLCOA-HYDROXY-RXN]] | * [[METHYLACYLYLCOA-HYDROXY-RXN]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
| − | |||
*** [[SJ03913]] | *** [[SJ03913]] | ||
| + | *** [[SJ07211]] | ||
*** [[SJ21390]] | *** [[SJ21390]] | ||
| − | |||
| − | |||
*** [[SJ03584]] | *** [[SJ03584]] | ||
| + | *** [[SJ10275]] | ||
| + | *** [[SJ14591]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-11213]] | * [[RXN-11213]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| + | *** [[SJ17249]] | ||
*** [[SJ00780]] | *** [[SJ00780]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.22-RXN 2.6.1.22-RXN] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=MEPROPCOA-FAD-RXN MEPROPCOA-FAD-RXN] | ||
== External links == | == External links == | ||
* ARACYC: | * ARACYC: | ||
| Line 90: | Line 83: | ||
{{#set: taxonomic range=TAX-1239}} | {{#set: taxonomic range=TAX-1239}} | ||
{{#set: common name=L-valine degradation I}} | {{#set: common name=L-valine degradation I}} | ||
| − | {{#set: reaction found= | + | {{#set: reaction found=6}} |
{{#set: total reaction=8}} | {{#set: total reaction=8}} | ||
| − | {{#set: completion rate= | + | {{#set: completion rate=75.0}} |
Latest revision as of 12:47, 10 January 2019
Pathway VALDEG-PWY
- taxonomic range:
- common name:
- L-valine degradation I
- Synonym(s):
Reaction(s) found
6 reactions found over 8 reactions in the full pathway
- 1.2.1.25-RXN
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN
- 5 associated gene(s):
- 4 reconstruction source(s) associated:
- 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN
- BRANCHED-CHAINAMINOTRANSFERVAL-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- METHYLACYLYLCOA-HYDROXY-RXN
- 6 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN-11213
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
Reaction(s) not found
External links
- ARACYC:
