Difference between revisions of "SJ07211"

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(Created page with "Category:Gene == Gene SJ07211 == * right end position: ** 840640 * transcription direction: ** NEGATIVE * left end position: ** 825487 * centisome position: ** 56.49857...")
 
 
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[[Category:Gene]]
 
[[Category:Gene]]
 
== Gene SJ07211 ==
 
== Gene SJ07211 ==
−
* right end position:
 
−
** 840640
 
 
* transcription direction:
 
* transcription direction:
 
** NEGATIVE
 
** NEGATIVE
 +
* right end position:
 +
** 840640
 
* left end position:
 
* left end position:
 
** 825487
 
** 825487
Line 13: Line 13:
 
== Reactions associated ==
 
== Reactions associated ==
 
* Reaction: [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
 
* Reaction: [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
* Reaction: [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 31: Line 31:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
 
* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 74: Line 74:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Reaction: [[RXN-11667]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Reaction: [[RXN-11667]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-12490]]
 
* Reaction: [[RXN-12490]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Reaction: [[RXN-12507]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Reaction: [[RXN-12507]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-12519]]
 
* Reaction: [[RXN-12519]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 97: Line 97:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-12705]]
 
* Reaction: [[RXN-12705]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 121: Line 121:
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14271]]
 
* Reaction: [[RXN-14271]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14272]]
 
* Reaction: [[RXN-14272]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 206: Line 206:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Reaction: [[RXN-6383]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Reaction: [[RXN-6383]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-6384]]
 
* Reaction: [[RXN-6384]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 244: Line 244:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
== Pathways associated ==
 
== Pathways associated ==
−
* [[P162-PWY]]
 
−
* [[OXIDATIVEPENT-PWY]]
 
−
* [[PWY-5177]]
 
−
* [[PWY-6583]]
 
−
* [[VALDEG-PWY]]
 
−
* [[PWY-6883]]
 
−
* [[PWY-7656]]
 
−
* [[PWY-5138]]
 
−
* [[PWY-5136]]
 
−
* [[PWY-5137]]
 
−
* [[PWY-7778]]
 
−
* [[PWY-7779]]
 
−
* [[PWY0-1337]]
 
−
* [[PWY-6824]]
 
−
* [[PWY-7574]]
 
−
* [[PWY-7094]]
 
−
* [[PWY-7654]]
 
−
* [[P3-PWY]]
 
−
* [[PWY66-391]]
 
−
* [[PWY-5466]]
 
 
* [[PWY-5789]]
 
* [[PWY-5789]]
 +
* [[PWY-7654]]
 +
* [[PWY-6944]]
 
* [[PWY-5461]]
 
* [[PWY-5461]]
−
* [[FAO-PWY]]
+
* [[PWY-7574]]
−
* [[PWY-6837]]
+
* [[PWY-6863]]
−
* [[PWY-7291]]
+
* [[PWY-5136]]
−
* [[CENTFERM-PWY]]
+
* [[PWY-7401]]
−
* [[PWY-6945]]
+
* [[PWY-6824]]
−
* [[PWY0-321]]
+
* [[PWY-5469]]
−
* [[PWY-5743]]
+
* [[PWY-7778]]
 
* [[ILEUDEG-PWY]]
 
* [[ILEUDEG-PWY]]
−
* [[PWY-5744]]
+
* [[PWY-5109]]
−
* [[PWY-7007]]
+
* [[PWY-7046]]
 +
* [[PWY0-321]]
 
* [[P122-PWY]]
 
* [[P122-PWY]]
−
* [[PWY-7726]]
+
* [[PWY-5743]]
−
* [[PWY-5469]]
+
 
* [[PWY-6435]]
 
* [[PWY-6435]]
−
* [[PWY-7214]]
 
−
* [[PWY-7046]]
 
−
* [[PWY-7216]]
 
−
* [[PWY-1361]]
 
−
* [[PWY-7606]]
 
−
* [[PWY-5109]]
 
 
* [[PWY-7445]]
 
* [[PWY-7445]]
−
* [[PWY-6946]]
 
 
* [[PWY-81]]
 
* [[PWY-81]]
−
* [[PWY-6944]]
+
* [[P162-PWY]]
 +
* [[PWY-7291]]
 +
* [[PWY0-1337]]
 +
* [[PWY-6883]]
 +
* [[PWY-7726]]
 +
* [[CENTFERM-PWY]]
 +
* [[PWY-7656]]
 +
* [[PWY-6945]]
 +
* [[PWY-6946]]
 +
* [[PWY-7606]]
 +
* [[VALDEG-PWY]]
 
* [[PWY-735]]
 
* [[PWY-735]]
−
* [[PWY-7401]]
+
* [[PWY-5744]]
−
* [[PWY-6863]]
+
* [[PWY-1361]]
 +
* [[P3-PWY]]
 +
* [[PWY-7214]]
 +
* [[FAO-PWY]]
 +
* [[PWY-6837]]
 +
* [[PWY-5138]]
 
* [[PWY-3941]]
 
* [[PWY-3941]]
 +
* [[PWY-6583]]
 +
* [[PWY-5466]]
 +
* [[PWY-5177]]
 +
* [[PWY-5137]]
 +
* [[PWY-7216]]
 +
* [[PWY-7779]]
 +
* [[PWY66-391]]
 +
* [[PWY-7007]]
 +
* [[OXIDATIVEPENT-PWY]]
 +
* [[PWY-7094]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=840640}}
 
 
{{#set: transcription direction=NEGATIVE}}
 
{{#set: transcription direction=NEGATIVE}}
 +
{{#set: right end position=840640}}
 
{{#set: left end position=825487}}
 
{{#set: left end position=825487}}
 
{{#set: centisome position=56.49857    }}
 
{{#set: centisome position=56.49857    }}
 
{{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN|6PGLUCONDEHYDROG-RXN|ENOYL-COA-DELTA-ISOM-RXN|ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10697|RXN-10698|RXN-10702|RXN-10703|RXN-10704|RXN-10705|RXN-11244|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12519|RXN-12567|RXN-12570|RXN-12705|RXN-12750|RXN-13616|RXN-13721|RXN-14240|RXN-14266|RXN-14271|RXN-14272|RXN-14273|RXN-15288|RXN-16133|RXN-16135|RXN-16558|RXN-17114|RXN-17352|RXN-17475|RXN-17776|RXN-17777|RXN-17780|RXN-17781|RXN-17785|RXN-17786|RXN-17789|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-6384|RXN-7836|RXN-7931|RXN-8635|RXN-902|RXN-905|RXN-9952|RXN0-2044|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
 
{{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN|6PGLUCONDEHYDROG-RXN|ENOYL-COA-DELTA-ISOM-RXN|ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10697|RXN-10698|RXN-10702|RXN-10703|RXN-10704|RXN-10705|RXN-11244|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12519|RXN-12567|RXN-12570|RXN-12705|RXN-12750|RXN-13616|RXN-13721|RXN-14240|RXN-14266|RXN-14271|RXN-14272|RXN-14273|RXN-15288|RXN-16133|RXN-16135|RXN-16558|RXN-17114|RXN-17352|RXN-17475|RXN-17776|RXN-17777|RXN-17780|RXN-17781|RXN-17785|RXN-17786|RXN-17789|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-6384|RXN-7836|RXN-7931|RXN-8635|RXN-902|RXN-905|RXN-9952|RXN0-2044|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
−
{{#set: pathway associated=P162-PWY|OXIDATIVEPENT-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-7656|PWY-5138|PWY-5136|PWY-5137|PWY-7778|PWY-7779|PWY0-1337|PWY-6824|PWY-7574|PWY-7094|PWY-7654|P3-PWY|PWY66-391|PWY-5466|PWY-5789|PWY-5461|FAO-PWY|PWY-6837|PWY-7291|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5743|ILEUDEG-PWY|PWY-5744|PWY-7007|P122-PWY|PWY-7726|PWY-5469|PWY-6435|PWY-7214|PWY-7046|PWY-7216|PWY-1361|PWY-7606|PWY-5109|PWY-7445|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863|PWY-3941}}
+
{{#set: pathway associated=PWY-5789|PWY-7654|PWY-6944|PWY-5461|PWY-7574|PWY-6863|PWY-5136|PWY-7401|PWY-6824|PWY-5469|PWY-7778|ILEUDEG-PWY|PWY-5109|PWY-7046|PWY0-321|P122-PWY|PWY-5743|PWY-6435|PWY-7445|PWY-81|P162-PWY|PWY-7291|PWY0-1337|PWY-6883|PWY-7726|CENTFERM-PWY|PWY-7656|PWY-6945|PWY-6946|PWY-7606|VALDEG-PWY|PWY-735|PWY-5744|PWY-1361|P3-PWY|PWY-7214|FAO-PWY|PWY-6837|PWY-5138|PWY-3941|PWY-6583|PWY-5466|PWY-5177|PWY-5137|PWY-7216|PWY-7779|PWY66-391|PWY-7007|OXIDATIVEPENT-PWY|PWY-7094}}

Latest revision as of 16:08, 10 January 2019

Gene SJ07211

  • transcription direction:
    • NEGATIVE
  • right end position:
    • 840640
  • left end position:
    • 825487
  • centisome position:
    • 56.49857
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=SJ07211&oldid=23919"