Difference between revisions of "3-DEHYDROSPHINGANINE-REDUCTASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] == * direction: ** LEFT-TO-R...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.1.1.102 EC-1.1.1.102] | ** [http://enzyme.expasy.org/EC/1.1.1.102 EC-1.1.1.102] | ||
| + | * common name: | ||
| + | ** 3-ketodihydrosphingosine reductase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13612]][c] '''+''' 1 [[NADP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 3-dehydrosphinganine[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 D-erythro-sphinganine[c] '''+''' 1 NADP+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 23: | Line 23: | ||
== Pathways == | == Pathways == | ||
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129] | * [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129] | ||
| − | ** ''' | + | ** '''4''' reactions found over '''13''' reactions in the full pathway |
| − | + | ||
| − | + | ||
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY] | * [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY] | ||
** '''4''' reactions found over '''8''' reactions in the full pathway | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 37: | Line 37: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22642 22642] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978] | ** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.1.1.102}} | {{#set: ec number=EC-1.1.1.102}} | ||
| + | {{#set: common name=3-ketodihydrosphingosine reductase}} | ||
{{#set: gene associated=SJ12778}} | {{#set: gene associated=SJ12778}} | ||
| − | {{#set: in pathway=PWY-5129 | + | {{#set: in pathway=PWY-5129|SPHINGOLIPID-SYN-PWY|PWY3DJ-12}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:02, 10 January 2019
Contents
Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3-ketodihydrosphingosine reductase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DEHYDROSPHINGANINE[c] + 1 NADPH[c] + 1 PROTON[c] => 1 CPD-13612[c] + 1 NADP[c]
- With common name(s):
- 1 3-dehydrosphinganine[c] + 1 NADPH[c] + 1 H+[c] => 1 D-erythro-sphinganine[c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ12778
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5129, sphingolipid biosynthesis (plants): PWY-5129
- 4 reactions found over 13 reactions in the full pathway
- SPHINGOLIPID-SYN-PWY, sphingolipid biosynthesis (yeast): SPHINGOLIPID-SYN-PWY
- 4 reactions found over 8 reactions in the full pathway
- PWY3DJ-12, ceramide de novo biosynthesis: PWY3DJ-12
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
