Difference between revisions of "RXN-9464"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-aminocyclopropane-1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-aminocyclopropane-1-carboxylate_synthase
+
** 3-oxoacyl-synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.14 EC-4.4.1.14]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-68]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c]
+
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[7Z-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 1-aminocyclopropane-1-carboxylate[c] '''+''' 1 S-methyl-5'-thioadenosine[c]
+
** 1 a malonyl-[acp][c] '''+''' 1 a (7Z)-hexadec-7-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8455]]
+
* [[Tiso_gene_5939]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** EXPERIMENTAL_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-7270]], L-methionine salvage cycle II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7270 PWY-7270]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[creinhardtii]]
 
−
*** [[athaliana]]
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21747 21747]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00179 R00179]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23279 P23279]
 
−
** [http://www.uniprot.org/uniprot/Q06402 Q06402]
 
−
** [http://www.uniprot.org/uniprot/Q07215 Q07215]
 
−
** [http://www.uniprot.org/uniprot/Q42881 Q42881]
 
−
** [http://www.uniprot.org/uniprot/Q00379 Q00379]
 
−
** [http://www.uniprot.org/uniprot/Q06429 Q06429]
 
−
** [http://www.uniprot.org/uniprot/Q9SB01 Q9SB01]
 
−
** [http://www.uniprot.org/uniprot/O24062 O24062]
 
−
** [http://www.uniprot.org/uniprot/Q9SB94 Q9SB94]
 
−
** [http://www.uniprot.org/uniprot/Q9FUC3 Q9FUC3]
 
−
** [http://www.uniprot.org/uniprot/Q94GA4 Q94GA4]
 
−
** [http://www.uniprot.org/uniprot/O24217 O24217]
 
−
** [http://www.uniprot.org/uniprot/Q9S9C5 Q9S9C5]
 
−
** [http://www.uniprot.org/uniprot/Q43309 Q43309]
 
−
** [http://www.uniprot.org/uniprot/P23599 P23599]
 
−
** [http://www.uniprot.org/uniprot/Q00257 Q00257]
 
−
** [http://www.uniprot.org/uniprot/Q43679 Q43679]
 
−
** [http://www.uniprot.org/uniprot/Q07223 Q07223]
 
−
** [http://www.uniprot.org/uniprot/Q7M286 Q7M286]
 
−
** [http://www.uniprot.org/uniprot/P27486 P27486]
 
−
** [http://www.uniprot.org/uniprot/P18485 P18485]
 
−
** [http://www.uniprot.org/uniprot/P29535 P29535]
 
−
** [http://www.uniprot.org/uniprot/Q41693 Q41693]
 
−
** [http://www.uniprot.org/uniprot/Q41694 Q41694]
 
−
** [http://www.uniprot.org/uniprot/P31531 P31531]
 
−
** [http://www.uniprot.org/uniprot/Q43858 Q43858]
 
−
** [http://www.uniprot.org/uniprot/Q43753 Q43753]
 
−
** [http://www.uniprot.org/uniprot/Q43813 Q43813]
 
−
** [http://www.uniprot.org/uniprot/Q43059 Q43059]
 
−
** [http://www.uniprot.org/uniprot/Q43167 Q43167]
 
−
** [http://www.uniprot.org/uniprot/Q43747 Q43747]
 
−
** [http://www.uniprot.org/uniprot/Q43074 Q43074]
 
−
** [http://www.uniprot.org/uniprot/Q42655 Q42655]
 
−
** [http://www.uniprot.org/uniprot/Q42718 Q42718]
 
−
** [http://www.uniprot.org/uniprot/Q43755 Q43755]
 
−
** [http://www.uniprot.org/uniprot/Q43756 Q43756]
 
−
** [http://www.uniprot.org/uniprot/Q43165 Q43165]
 
−
** [http://www.uniprot.org/uniprot/O22464 O22464]
 
−
** [http://www.uniprot.org/uniprot/Q43166 Q43166]
 
−
** [http://www.uniprot.org/uniprot/Q43168 Q43168]
 
−
** [http://www.uniprot.org/uniprot/Q37001 Q37001]
 
−
** [http://www.uniprot.org/uniprot/Q43201 Q43201]
 
−
** [http://www.uniprot.org/uniprot/Q43204 Q43204]
 
−
** [http://www.uniprot.org/uniprot/O49904 O49904]
 
−
** [http://www.uniprot.org/uniprot/Q42984 Q42984]
 
−
** [http://www.uniprot.org/uniprot/O24220 O24220]
 
−
** [http://www.uniprot.org/uniprot/Q07262 Q07262]
 
−
** [http://www.uniprot.org/uniprot/O24219 O24219]
 
−
** [http://www.uniprot.org/uniprot/P93235 P93235]
 
−
** [http://www.uniprot.org/uniprot/Q9STR4 Q9STR4]
 
−
** [http://www.uniprot.org/uniprot/Q9T065 Q9T065]
 
−
** [http://www.uniprot.org/uniprot/O24609 O24609]
 
−
** [http://www.uniprot.org/uniprot/Q42893 Q42893]
 
−
** [http://www.uniprot.org/uniprot/Q96579 Q96579]
 
−
** [http://www.uniprot.org/uniprot/Q96580 Q96580]
 
−
** [http://www.uniprot.org/uniprot/P93234 P93234]
 
−
** [http://www.uniprot.org/uniprot/O24432 O24432]
 
−
** [http://www.uniprot.org/uniprot/O65017 O65017]
 
−
** [http://www.uniprot.org/uniprot/O65018 O65018]
 
−
** [http://www.uniprot.org/uniprot/Q42668 Q42668]
 
−
** [http://www.uniprot.org/uniprot/O49819 O49819]
 
−
** [http://www.uniprot.org/uniprot/O81957 O81957]
 
−
** [http://www.uniprot.org/uniprot/O65159 O65159]
 
−
** [http://www.uniprot.org/uniprot/Q41688 Q41688]
 
−
** [http://www.uniprot.org/uniprot/O24544 O24544]
 
−
** [http://www.uniprot.org/uniprot/Q39931 Q39931]
 
−
** [http://www.uniprot.org/uniprot/Q9SAR0 Q9SAR0]
 
−
** [http://www.uniprot.org/uniprot/P37821 P37821]
 
−
** [http://www.uniprot.org/uniprot/O24061 O24061]
 
−
** [http://www.uniprot.org/uniprot/Q9M2Y8 Q9M2Y8]
 
−
** [http://www.uniprot.org/uniprot/Q9SMH1 Q9SMH1]
 
−
** [http://www.uniprot.org/uniprot/Q9SEJ9 Q9SEJ9]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-aminocyclopropane-1-carboxylate_synthase}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: ec number=EC-4.4.1.14}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: gene associated=Tiso_gene_8455}}
+
{{#set: gene associated=Tiso_gene_5939}}
−
{{#set: in pathway=ETHYL-PWY|PWY-7270}}
+
{{#set: in pathway=PWY-7664}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:44, 10 January 2018

Reaction RXN-16625

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_5939
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9464&oldid=10238"