Difference between revisions of "RXN-17127"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** lipoate-protein_ligase_a
+
** glutamyl_or_glutaminyl_trna_synthetase
−
** lipoate-protein_ligase
+
** glutamine--trna_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
+
** [http://enzyme.expasy.org/EC/6.1.1.18 EC-6.1.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c]
+
** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAgln[c] '''=>''' 1 an L-glutaminyl-[tRNAgln][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17215]]
+
* [[Tiso_gene_7596]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11124]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_4494]]
+
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5915]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_8713]]
+
** EXPERIMENTAL_ANNOTATION
−
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4493]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_17216]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20121 20121]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O59314 O59314]
 +
** [http://www.uniprot.org/uniprot/P43831 P43831]
 +
** [http://www.uniprot.org/uniprot/P47897 P47897]
 +
** [http://www.uniprot.org/uniprot/P14325 P14325]
 +
** [http://www.uniprot.org/uniprot/P95968 P95968]
 +
** [http://www.uniprot.org/uniprot/P13188 P13188]
 +
** [http://www.uniprot.org/uniprot/P00962 P00962]
 +
** [http://www.uniprot.org/uniprot/P52780 P52780]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipoate-protein_ligase_a}}
+
{{#set: common name=glutamyl_or_glutaminyl_trna_synthetase}}
−
{{#set: common name=lipoate-protein_ligase}}
+
{{#set: common name=glutamine--trna_ligase}}
−
{{#set: ec number=EC-6.3.1.20}}
+
{{#set: ec number=EC-6.1.1.18}}
−
{{#set: gene associated=Tiso_gene_17215|Tiso_gene_4494|Tiso_gene_8713|Tiso_gene_4493|Tiso_gene_17216}}
+
{{#set: gene associated=Tiso_gene_7596|Tiso_gene_11124|Tiso_gene_5915}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:46, 10 January 2018

Reaction GLUTAMINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamyl_or_glutaminyl_trna_synthetase
    • glutamine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 ATP[c] + 1 a tRNAgln[c] => 1 an L-glutaminyl-[tRNAgln][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17127&oldid=10339"