Difference between revisions of "RXN-12959"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BETAINE-ALDEHYDE-HYDRATE BETAINE-ALDEHYDE-HYDRATE] == * smiles: ** C[N+](C)(CC(O)O)C * inchi ke...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * common name: ** nitrilase * ec number: ** [ht...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BETAINE-ALDEHYDE-HYDRATE BETAINE-ALDEHYDE-HYDRATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
−
* smiles:
+
* direction:
−
** C[N+](C)(CC(O)O)C
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=HEHORKLRCFPRON-UHFFFAOYSA-N
+
 
* common name:
 
* common name:
−
** betaine aldehyde hydrate
+
** nitrilase
−
* molecular weight:
+
* ec number:
−
** 120.171   
+
** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
−
* [[RXN-6268]]
+
* With common name(s):
 +
** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_10996]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
 +
** '''1''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6395359 6395359]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
−
* CHEMSPIDER:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.chemspider.com/Chemical-Structure.4909131.html 4909131]
+
{{#set: common name=nitrilase}}
−
* CHEBI:
+
{{#set: ec number=EC-3.5.5.1}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15870 15870]
+
{{#set: gene associated=Tiso_gene_10996}}
−
* LIGAND-CPD:
+
{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C07345 C07345]
+
{{#set: reconstruction category=orthology}}
−
{{#set: smiles=C[N+](C)(CC(O)O)C}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: inchi key=InChIKey=HEHORKLRCFPRON-UHFFFAOYSA-N}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
−
{{#set: common name=betaine aldehyde hydrate}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: molecular weight=120.171    }}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: consumed or produced by=RXN-6268}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:54, 10 January 2018

Reaction RXN-1404

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nitrilase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi): PWY-5026
    • 1 reactions found over 1 reactions in the full pathway
  • PWYQT-4476, indole glucosinolate activation (herbivore attack): PWYQT-4476
    • 1 reactions found over 13 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12959&oldid=10849"